Gene
RNA
| Item | Value |
|---|---|
| gene id | G2175120 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 31490914 ~ 31491155 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2486072 | True | 242 | lncRNA | 0.48 | 1 | 31490914 | 31491155 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ephb4a | LOC106603099 | coding | upstream | 3798 | 31437057 ~ 31487116 (+) |
| LOC110509418 | LOC106563427 | coding | upstream | 47174 | 31237429 ~ 31443740 (+) |
| mepce | LOC106563428 | coding | upstream | 259383 | 31226337 ~ 31231531 (+) |
| her1 | LOC106603184 | coding | upstream | 271937 | 31217958 ~ 31218977 (+) |
| LOC110510025 | LOC106563429 | coding | upstream | 433105 | 31022733 ~ 31057809 (+) |
| LOC110510029 | LOC106563422 | coding | downstream | 131550 | 31622705 ~ 31640277 (+) |
| spag7 | spag7 | coding | downstream | 155418 | 31646573 ~ 31652210 (+) |
| chrdl2 | LOC106563420 | coding | downstream | 162322 | 31653477 ~ 31659720 (+) |
| neu3.1 | neu3 | coding | downstream | 187916 | 31679071 ~ 31682119 (+) |
| st14b | LOC106563416 | coding | downstream | 198991 | 31690146 ~ 31701571 (+) |
| G2175119 | NA | non-coding | upstream | 840 | 31489707 ~ 31490074 (+) |
| G2174813 | NA | non-coding | upstream | 9599 | 31478145 ~ 31481315 (+) |
| G2174832 | NA | non-coding | upstream | 21839 | 31468203 ~ 31469075 (+) |
| G2174807 | NA | non-coding | upstream | 58728 | 31431786 ~ 31432186 (+) |
| G2174721 | NA | non-coding | upstream | 311175 | 31179434 ~ 31179739 (+) |
| G2175127 | NA | non-coding | downstream | 20470 | 31511625 ~ 31512044 (+) |
| G2175128 | NA | non-coding | downstream | 20919 | 31512074 ~ 31512403 (+) |
| G2175147 | NA | non-coding | downstream | 45169 | 31536324 ~ 31536555 (+) |
| G2175149 | NA | non-coding | downstream | 46146 | 31537301 ~ 31537807 (+) |
| G2175165 | NA | non-coding | downstream | 64864 | 31556019 ~ 31556333 (+) |
| G2174785 | NA | other | upstream | 172537 | 31317837 ~ 31318377 (+) |
| LOC110510022 | LOC106563433 | other | upstream | 666770 | 30817845 ~ 30824144 (+) |
| G2173841 | LOC106563447 | other | upstream | 1022790 | 30463942 ~ 30468124 (+) |
| G2173761 | LOC106563448 | other | upstream | 1150223 | 30336852 ~ 30355090 (+) |
| G2173754 | LOC106563449 | other | upstream | 1167299 | 30319648 ~ 30323615 (+) |
| G2175233 | psmb6 | other | downstream | 119389 | 31610544 ~ 31611469 (+) |
| LOC110509422 | LOC106563560 | other | downstream | 409826 | 31820484 ~ 31908546 (+) |
| G2175413 | NA | other | downstream | 545892 | 32037047 ~ 32037736 (+) |
| LOC110509425 | LOC106563572 | other | downstream | 630615 | 32115629 ~ 32150579 (+) |
| cxxc5a | LOC106563628 | other | downstream | 1731662 | 33212994 ~ 33235535 (+) |
