dnajb13 (dnajb13)


Basic Information

Item Value
gene id dnajb13
gene name dnajb13
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 24167029 ~ 24171242 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826400.1
ACCCTGGAAACCGAGCTAGCTAAACAACTGCCCTGAGTTTTAATTGTGGCAAAGCCGCGTGAGGGCACATTGGGCtttccttttactttttaagtTAATTTTAAGCATTTGATACATAATGGGAAGCGATTACTACGAGACGctggaaataaacaaaaatgcaaCCGACGCAGATATCAAAAAGGCATATCGACGTCTTGCATTGAAGTTTCATCCGAGCAGCAACAGAGAAACCGGAAGCAGTGACAAATTCTGTCAGCTGGGTGAAGCCTACGATGTGTTGAGCGACCCTCGGAAAAAAGCAACCTATGACAAGTTTGGTGAGGAGGGTCTAAAAGCTGGGATCCCACCTGAGTTTGGCAGCAGTGGGGCTTGGTCATCTAAATATGTCTACCATGGGAACCCAGACAAAACATTCAGAGAGTTCTTTGGAGGCGACAACCCATTTGCAGACTTTTATACAAATGATGCACCACTTCAGTTCGGTGGCCTGAAACCAGGAGTGGTGAAGACCCAAGATTCTCACATAGAGAGAGACCTGCATTTGTCTCTGGACGATCTCTTCCACGGatgcacaaaaaagattaaGATATCACGACGGGTTATGAATGAGGATGGATTCACATCTGGTATCAAAGACAAGATCCTGACTATAGATGTGAAGCCTGGATGGAAAGAAGGCACAAGAATAATTTTCCCCAAAGAGGGAGATCAGGGACCAAACAACATCCCTGCAGATATAGTGTTCATGGTGCGACAGAAGAGTCACCCCCTGTTCGTAAGACAACACAATGACCTGATCTACAAGGCCCAGATCACTCTGGAGATGGCCTTGACTGGGTTCTCTGTGGACGTGGAGACACTAGATGGCAGGCTAATCAGTATTCCCTTCAATGACATTGTACATCCTGCGTACAACAAAGTGGTGACCAGAGAGGGAATGCCGCTGTCCCAGGATCCTTCCCAGAGAGGAAACCTCGTCATTACTTTTGACATCCAGTTTCCTGAGAAGCTCTCCGCCGAGAGGAAGCATCTGATCAAACAAGCTCTAGCTTAAATATTGATCACTTTCTAATACATGTGTTGCTGTCCTTTGACTTAACGTGGtcatgagagagagatagaggtgTCAACACAATTTGTTTAACGTTGATActtgaaatataaaatatacactAGGATGCAACAAaagtgaagatttttttttttttaaacaacaccACTGTGCTGCAACATCAGCGTTCTGACCGACAATAATGACTACAGCATAGTTGTGCAGTT

Function

symbol description
dnajb13 Predicted to enable chaperone binding activity and unfolded protein binding activity. Predicted to be involved in chaperone cofactor-dependent protein refolding. Predicted to act upstream of or within protein folding. Predicted to be active in cytosol. Is expressed in Kupffer's vesicle; nervous system; and pronephric duct. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 34. Orthologous to human DNAJB13 (DnaJ heat shock protein family (Hsp40) member B13).

NR:

description
dnaJ homolog subfamily B member 13

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K09519 DNAJB13; DnaJ homolog subfamily B member 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826400.1 True 1281 mRNA 0.44 8 24167029 24171242

Neighbor

gene id symbol gene type direction distance location
LOC120575597 rab6a coding upstream 1102 24156450 ~ 24165927 (+)
pafah1b2 pafah1b2 coding upstream 60409 24101164 ~ 24106620 (+)
arhgap35b LOC103363264,LOC103395548 coding upstream 153859 24001987 ~ 24013170 (+)
LOC120543788 NA coding upstream 181424 23982750 ~ 23985605 (+)
cchcr1 NA coding upstream 340315 23816480 ~ 23826714 (+)
ppme1 ppme1 coding downstream 10834 24182076 ~ 24187468 (+)
LOC120575602 NA coding downstream 16834 24188076 ~ 24191168 (+)
nectin3b nectin3,LOC103363279,LOC100689882,LOC102788848,LOC102195880,LOC101479710 coding downstream 24360 24195602 ~ 24223611 (+)
ppm1nb LOC103366298,LOC106516403,LOC103475725 coding downstream 66367 24237609 ~ 24243371 (+)
ccdc61 ccdc61 coding downstream 81319 24252561 ~ 24259956 (+)
G168318 NA non-coding upstream 73230 24090275 ~ 24093799 (+)
G168311 dscaml1,LOC107087877,LOC103395551,LOC106534979,LOC108247600,LOC105929366 non-coding upstream 133811 24032761 ~ 24033218 (+)
G168301 NA non-coding upstream 153083 24013734 ~ 24013946 (+)
G168291 LOC104954468,LOC103363262 non-coding upstream 180492 23985682 ~ 23986537 (+)
LOC120543877 NA non-coding upstream 217924 23945418 ~ 23949105 (+)
G168360 NA non-coding downstream 3935 24175177 ~ 24178539 (+)
G168383 NA non-coding downstream 53972 24225214 ~ 24228577 (+)
G168460 NA non-coding downstream 224200 24395442 ~ 24398629 (+)
LOC120543831 clg10hxorf57,LOC103366308,LOC102289771 non-coding downstream 233873 24405115 ~ 24406976 (+)
G168473 NA non-coding downstream 267327 24438569 ~ 24441195 (+)
G168226 thoc2 other upstream 238548 23927342 ~ 23928481 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other upstream 248552 23841533 ~ 23918477 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other upstream 1521203 22621393 ~ 22645826 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other upstream 1744975 22394516 ~ 22422054 (+)
kif20a kif20a,LOC102778170 other upstream 2022830 22134507 ~ 22144199 (+)
gab3 NA other downstream 239063 24410305 ~ 24420345 (+)
LOC120544202 LOC104958513,LOC101062417,LOC108233857,LOC103359319 other downstream 815223 24986465 ~ 24989389 (+)
LOC120575613 LOC103357740,LOC104968174 other downstream 1668162 25839404 ~ 25846377 (+)
LOC120543603 LOC103357742,LOC104968170 other downstream 1696912 25868154 ~ 25892531 (+)
nlgn2b nlgn2b,LOC104920019,LOC101475673,LOC100709892,LOC102787387 other downstream 1828821 26000063 ~ 26223445 (+)

Expression


Co-expression Network