G179464


Basic Information

Item Value
gene id G179464
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 31656916 ~ 31659171 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU243017
TGCGTTATGATAGTTCCTATTATTGCACACAGAGCTGACAAATGACATTGAAACCAGGATGatggacatttttctttttacaggaACTTAAACAGAGAAAGAAACGATGATTACATAAAAACAAGAACTTGTGCCACAGATACAGTGAACCCCATGGAGTAGACGaccatttaaaaaatgcataaacacactgacaaacaatatgtaaaaaaggaaaatgtatgAAGAACATGAAAAGGAGAAAGTAAAATGCACAAGTATCTCgtaaaaaaaatcttgttttgtatgcacatttttcacattCCTTTATTCGTTGGATTAAAAACACAGATTCCAGATCTGTAGCAAAAAGCAACATCTATAGTACCTTTAGCTCATTACCTGACTCAATGTTGcagaaaatgtttaaaacaatcCAGAGTGTTTTGGTGATTAATTCGTTGGGTGGAATTTGAGTCACAGCACAACAAACAGCATCTCTACAAATGCATCATACTCTCATGAACAGGTTCGTATCATATTGCACGAAAACGTAAGCACACAAATTCGTAttatatcctacgaaattaggtgACCGCCGGCTGATCACGTTGGGCCAGCTAAAGCAACAGTTGCTAGTTGAGTTTAGGGGGAaaaaggtgactttgagccaacTACAGAGCACTGCGAGCTGCTGGTTGCGTCAGTTAAGTTACAGCAAAGTTTACCCGACAAAATGTGAGCGTGATGCGGCGACAAGTGATGATtgttcaacgcattctcatgaacggttCGTATGATTTCGTACGAAAACTTATGCACAGCAATTCGtacgatatcctacgaaattaggcgaCTGCCGGCCAGTCACGAGACAGTaaagtttagcggtctttacagcTAAATTTAGCCGAAAAAAGGCGACTGTAAGCCGGGTATAGAGCACCGTGAAGTGACGGTCGTTTCAGCGGACATTACGGTTAAGTTTAGCCaacaaaaagtgagcgtcaatcggcgacgacagttaagtttaggcaccaaaacgactagttaagattagtaaaaaagatcgtggtttggattaaaacacttccGAGGAACGAACAACCGTTtgctgggtgaaagtcttgtgtctGACAGTAATAATTGTGTGGAATACATACCAATTACAGTGCTTTTCATGCCTATATATACGAATGGTtgcatgagaacagcctgacaAATGCTTCTGTACGTGCAGCGTGTACTACGTGATCAGATCTGTAAACAGCATCATCGCTTCAGTTCCAATGACCTTTATTAAACATCACAGTCCATTCATAGTTTTAAAGTATACAATAAGTTAAATTCATATGGCTTCATGTAGTATCTATATTATATATCCTATGATTaatagcacacacacattcataataACCCAACCCTGTCTCCTACAAAATGACGCTCCCATACAACGAAACTGCGTTCTCAATTACGTTTTGAAGGAAACATATTTTCCAGCACCTGGCGCACGGAAACGGTCACTGTTTTAAACACGGGTTAACATGGCGAAATGACAccaaactacttggttaggtttagaaaaagatgatggtttgggttaaaacaacAAAGTTTGTTACTTAATTGACCTCACGTTCGTAAGTTACGCTAAACGGATGCATTTCCGACTTTAAAAATGTTGGTGAAATGTTGGCTCCTAGGACTGTTGCTCAAACTACAGATTGTACTTCCGCATATGGACACAAAGAGTTTAAAAGCGGATCGAGAGAGATACTCAGACCGAACCTAGATTAAagaggcgctatgcagttttggccatttcttcacTGTCTgcgctttttgctcgcaggtttctctatagatcCTCCCCTACCGGTTTCTCTATAGAtcctcccctacaggtttctctatagagcccccccacaggtttctctatagagctccccctacaggtttctctatagagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243017 True 1949 lncRNA 0.40 2 31656916 31659171

Neighbor

gene id symbol gene type direction distance location
LOC120545075 LOC103356563,LOC102778235,LOC100706525,LOC101479232,LOC102204790,LOC107394700 coding upstream 198310 31428167 ~ 31458606 (+)
mctp1b LOC103356564,LOC102203739,LOC101478578,LOC102777952 coding upstream 253949 31303145 ~ 31402967 (+)
sept5b LOC103356565,LOC105913293 coding upstream 416878 31202551 ~ 31240038 (+)
acads acads coding upstream 504749 31126459 ~ 31152167 (+)
crybb1 crybb1,LOC101477459 coding upstream 533711 31115852 ~ 31123205 (+)
LOC120546097 NA coding downstream 139060 31798231 ~ 31800033 (+)
LOC120544976 NA coding downstream 182954 31842125 ~ 31844197 (+)
LOC120545076 NA coding downstream 196809 31855980 ~ 31858839 (+)
LOC120545679 NA coding downstream 206232 31865403 ~ 31867512 (+)
LOC120545680 LOC102797342 coding downstream 210776 31869947 ~ 31873051 (+)
G179441 NA non-coding upstream 134538 31521881 ~ 31522378 (+)
G179445 NA non-coding upstream 147911 31486666 ~ 31509005 (+)
LOC120545160 NA non-coding upstream 161496 31464000 ~ 31495420 (+)
G179440 NA non-coding upstream 177643 31438522 ~ 31479273 (+)
G179475 NA non-coding downstream 58754 31717925 ~ 31720315 (+)
G179480 NA non-coding downstream 87214 31746385 ~ 31747463 (+)
G179483 NA non-coding downstream 93758 31752929 ~ 31753334 (+)
G179567 NA non-coding downstream 173380 31832551 ~ 31832854 (+)
G179571 NA non-coding downstream 195606 31854777 ~ 31855576 (+)
LOC120545154 hapln1,LOC101070352,LOC100699000,LOC101480665 other upstream 3333 31565245 ~ 31653583 (+)
G179407 NA other upstream 176822 31387747 ~ 31480094 (+)
LOC120545414 LOC106676976 other upstream 1325302 30324112 ~ 30331614 (+)
zmiz2 zmiz2 other upstream 1346022 30259366 ~ 30310894 (+)
G178881 NA other upstream 1634699 30021319 ~ 30022217 (+)
LOC120544927 NA other downstream 152558 31811729 ~ 31832260 (+)
LOC120545711 NA other downstream 400754 32059925 ~ 32078010 (+)
G179655 cox5b,LOC106567989,LOC106563057 other downstream 420006 32079177 ~ 32099542 (+)
LOC120545732 lage3,LOC103372999 other downstream 782839 32442010 ~ 32448815 (+)
LOC120545086 LOC100699756 other downstream 1305790 32964961 ~ 32984052 (+)

Expression


Co-expression Network