acads (acads)


Basic Information

Item Value
gene id acads
gene name acads
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 31126459 ~ 31152167 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780195.1
ATTCCGACAGCACGTAAAGGCAGCAGCGTGCTTCATATCACCTCAGTCAAACTCATTGAAAGATAGTTTGCTACCTGAAGCCAGGAGAAAGGAGTCATGGCTGCACTTTTTAAAGCAAGGAAAGctctcgCAGTGTGTCTCGCTGGCTGTCGAAGTCTGTCCCAGCTGGCAGAGTTACCGGAGACTCATCAGCTTCTTAGACAGACGTGCAGAGACTTCGCCGACAGAGAACTGGCCCCCATCGCTGCCAGGCTGGACAAGGAGCATTCTTACCCTGCCAAACAGATCCAGGAGTTGGGGGCGATGGGGGTGATGGCCATGGAGGTCCCCGAGGAGCTGGGTGGAGCCGGGATGGACTACCTGGCGTACAGTCTGGCTATGGAGGAAATCAGCCGAGGCTGCGCCAGCACGGGAGTCGTGGTGTCTGTAAATAATTCTCTCTACATCGGGCCGATACTGAAGAACGGAACAGAAGAACAGAAAACGCAGTGGATCACGCCTTTCACCACCGGAGAGAAGGTGGGCTGCTTCGCCCTCAGCGAGCCAGGTAACGGCAGCGACGCGGGCGCGGCCTCCACGGTGGCCCGTCAGGACGGAGACGAGTGGGTGCTGAACGGAACCAAAGCCTGGATCACCAACAGCTGGGACGCCTCCGCCACGGTCGTGTTCGCCACCACGGACAAGAAACTCAAACACAAGGGCATCAGCGCCTTCCTGATCCCCATGCCCCACCCGGGCCTTTCTCTGGGGAAGAAGGAAGACAAGCTGGGCATCCGAGCCTCGTCCACGGCTAACATCATCCTGGAGGACTGCCGGGTACCGCTGGACAACATGCTCGGACCGCGCGGCGCTGGGTTCAAGATCGCCATGCAAACCCTGGACAGTGGACGGATCGGCATCGCTGCTCAGGCTCTCGGTATCGCTCAGGCGTCTCTGGACTGCGCTGCGGACTACGCACACAAACGCACCGCCTTCGGATCCCCGATCGGCAAGCTGCAGGCCATACAGATCAAACTAGCTGACATGGCTGTGGCGATAGAGAGCGCTCGTCTGCTCACCTGGAAGGCCGCCCTTCTTCGGGATTCAAAGAAGCCCTTCACCAAGGAAGCAGCCATGGCCAAACTAGCGGCGTCTGAAGCCGCCACTTTCTGCTCACATCAGGCGATCCAGATTCTGGGTGGGATGGGTTACGTGTCGGACATGCCCGCCGAGAGGCACTACCGCGACGCTCGCATTACCGAGATCTACGAGGGAACCAGTGAGATCCAGAGACTGGTTATCGCCGGCCAGTTGCTGAAGGAATACCAATCGTAGACACGCTTGTGTCGGCGCCTTTTGGTACAACGTGGACACATAATCTCCCAGATCTGGAGTCAGATAAGTCAGCCCGGACACACAACACCTCATCCATAAAGAGACAGAAGAACCAGTACGAGTTGAGCCGCAGCTTTTATACGTTTTTGGCAGCAGGGTCGATCGGAGACGACAGTACAGAAGTTCAGAGGAAATTCAGACAGTTTTTTAAGTGTCCATTTCCTTTTGTTGTCTGAAGGAAATTCAGGAATTAATTTTTCACACTGTGAGCTTACGATTTATCTCCGCTGCCTTAATGGGAATATTTGTGCATCGCTGGTTTAAAGGGTcatttcacttaaaaaaaaaaatgttttaacatattttctACTAGTAGTGTCGAGCCATGCATTTTCTTTGTGCAGTTTTGAGAGATCAAACTCTGTCTTGGTGCTCAAAGAAAAGTAGTTTTTAGTCACCTTTTTTTAATGATGAATAGAGAGGTGAAGTCCCTCCCCCTCCGTTGGACCTCCACGGGaccttatttaaaaagaaatatgtcCGATTAGTGAACTGG

Function

symbol description
acads Predicted to enable butyryl-CoA dehydrogenase activity. Predicted to be involved in butyrate catabolic process. Human ortholog(s) of this gene implicated in short chain acyl-CoA dehydrogenase deficiency. Orthologous to human ACADS (acyl-CoA dehydrogenase short chain).

NR:

description
PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0003995 acyl-CoA dehydrogenase activity molecular_function

KEGG:

id description
K00248 ACADS, bcd; butyryl-CoA dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780195.1 True 1870 mRNA 0.54 10 31126459 31152167

Neighbor

gene id symbol gene type direction distance location
crybb1 crybb1,LOC101477459 coding upstream 3254 31115852 ~ 31123205 (+)
slc4a5b LOC102799615,LOC102199953,LOC101477060,LOC107395321,LOC102294077,LOC108245384 coding upstream 443385 30587007 ~ 30683074 (+)
scarb1 NA coding upstream 583926 30511961 ~ 30542533 (+)
ash2l ash2l coding upstream 660247 30450437 ~ 30466212 (+)
ddx56 ddx56 coding upstream 727350 30381981 ~ 30399109 (+)
sept5b LOC103356565,LOC105913293 coding downstream 50384 31202551 ~ 31240038 (+)
mctp1b LOC103356564,LOC102203739,LOC101478578,LOC102777952 coding downstream 150978 31303145 ~ 31402967 (+)
LOC120545075 LOC103356563,LOC102778235,LOC100706525,LOC101479232,LOC102204790,LOC107394700 coding downstream 276000 31428167 ~ 31458606 (+)
LOC120546097 NA coding downstream 646064 31798231 ~ 31800033 (+)
LOC120544976 NA coding downstream 689958 31842125 ~ 31844197 (+)
LOC120545659 cryba4,LOC106563090,LOC106568369 non-coding upstream 25065 31087989 ~ 31101394 (+)
G179262 NA non-coding upstream 80705 31045248 ~ 31045754 (+)
G179250 NA non-coding upstream 167642 30958580 ~ 30958817 (+)
G179236 NA non-coding upstream 257201 30868018 ~ 30869258 (+)
G178996 NA non-coding upstream 340764 30785298 ~ 30785695 (+)
G179284 NA non-coding downstream 19636 31171803 ~ 31173196 (+)
G179293 NA non-coding downstream 36838 31189005 ~ 31243650 (+)
G179297 NA non-coding downstream 65645 31217812 ~ 31237130 (+)
G179288 NA non-coding downstream 72659 31224826 ~ 31226354 (+)
G179298 NA non-coding downstream 84408 31236575 ~ 31278338 (+)
LOC120545414 LOC106676976 other upstream 794845 30324112 ~ 30331614 (+)
zmiz2 zmiz2 other upstream 815565 30259366 ~ 30310894 (+)
G178881 NA other upstream 1104242 30021319 ~ 30022217 (+)
LOC120545429 LOC104948058 other upstream 1330634 29793804 ~ 29795825 (+)
G178845 NA other upstream 1376164 29742623 ~ 29750295 (+)
G179407 NA other downstream 235580 31387747 ~ 31480094 (+)
LOC120545154 hapln1,LOC101070352,LOC100699000,LOC101480665 other downstream 413078 31565245 ~ 31653583 (+)
LOC120544927 NA other downstream 659562 31811729 ~ 31832260 (+)
LOC120545711 NA other downstream 907758 32059925 ~ 32078010 (+)
G179655 cox5b,LOC106567989,LOC106563057 other downstream 927010 32079177 ~ 32099542 (+)

Expression


Co-expression Network