G179236


Basic Information

Item Value
gene id G179236
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 30868018 ~ 30869258 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU242671
ccactacgttcacctgttccagctttagttactagttacttcagttactccgctacattcacctgttccagctttagttactagttactttagttactccgctacattcacctgttccagctttagttactagttagtttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttacagctttagttactagttactttagttactccgctacattcatctgttacagctttagttactagttactttagttactccgctacattcacctgttccagctttagttactagttactttagttactccactacattcatctgttccagctttagtgactagttactttagttactccactacattcatctgttccagctttagttactagttactttagttactccgctacattcatgtgttatagctttagttactagttactttagttactccgctacattcatctgttacagctttagttactagttactttagttaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242671 True 604 lncRNA 0.36 2 30868018 30869258

Neighbor

gene id symbol gene type direction distance location
slc4a5b LOC102799615,LOC102199953,LOC101477060,LOC107395321,LOC102294077,LOC108245384 coding upstream 184944 30587007 ~ 30683074 (+)
scarb1 NA coding upstream 325485 30511961 ~ 30542533 (+)
ash2l ash2l coding upstream 401806 30450437 ~ 30466212 (+)
ddx56 ddx56 coding upstream 468909 30381981 ~ 30399109 (+)
LOC120545426 LOC103129635,LOC106953379,LOC106904245,LOC107386157,LOC105916632,LOC103470758,LOC100699155,LOC102206240,LOC102305468 coding upstream 523215 30338710 ~ 30344803 (+)
crybb1 crybb1,LOC101477459 coding downstream 246594 31115852 ~ 31123205 (+)
acads acads coding downstream 257201 31126459 ~ 31152167 (+)
sept5b LOC103356565,LOC105913293 coding downstream 333293 31202551 ~ 31240038 (+)
mctp1b LOC103356564,LOC102203739,LOC101478578,LOC102777952 coding downstream 433887 31303145 ~ 31402967 (+)
LOC120545075 LOC103356563,LOC102778235,LOC100706525,LOC101479232,LOC102204790,LOC107394700 coding downstream 558909 31428167 ~ 31458606 (+)
G178996 NA non-coding upstream 82323 30785298 ~ 30785695 (+)
G178984 ubb,UBC,LOC104949107,LOC104616321,LOC107588961,LOC107553588,LOC100135966 non-coding upstream 179910 30684876 ~ 30688108 (+)
G178983 NA non-coding upstream 183540 30684199 ~ 30684478 (+)
LOC120544906 NA non-coding upstream 290812 30576309 ~ 30577206 (+)
G178950 NA non-coding upstream 437368 30423953 ~ 30430650 (+)
G179250 NA non-coding downstream 89322 30958580 ~ 30958817 (+)
G179262 NA non-coding downstream 175990 31045248 ~ 31045754 (+)
LOC120545659 cryba4,LOC106563090,LOC106568369 non-coding downstream 218731 31087989 ~ 31101394 (+)
G179269 NA non-coding downstream 240533 31109791 ~ 31195586 (+)
G179284 NA non-coding downstream 302545 31171803 ~ 31173196 (+)
LOC120545414 LOC106676976 other upstream 536404 30324112 ~ 30331614 (+)
zmiz2 zmiz2 other upstream 557124 30259366 ~ 30310894 (+)
G178881 NA other upstream 845801 30021319 ~ 30022217 (+)
LOC120545429 LOC104948058 other upstream 1072193 29793804 ~ 29795825 (+)
G178845 NA other upstream 1117723 29742623 ~ 29750295 (+)
G179407 NA other downstream 518489 31387747 ~ 31480094 (+)
LOC120545154 hapln1,LOC101070352,LOC100699000,LOC101480665 other downstream 695987 31565245 ~ 31653583 (+)
LOC120544927 NA other downstream 942471 31811729 ~ 31832260 (+)
LOC120545711 NA other downstream 1190667 32059925 ~ 32078010 (+)
G179655 cox5b,LOC106567989,LOC106563057 other downstream 1209919 32079177 ~ 32099542 (+)

Expression


Co-expression Network