G67628


Basic Information

Item Value
gene id G67628
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 37700514 ~ 37707458 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU90396
tgtctttttttctgtggtTTAATGTCTGTATATATAAACATGATATTTACAAATCATACAATGAACATCAGTTAGTTATGGAATAAAACATGTATTACCGTCTCACGAATGattaacagaaaaacacacagtcaTCATCCAACACAGACATTGCTAAAAAATACCCTTCAGTAGAAGTTAGTGCCCCCTGGGAGTTGTAGCAGCCAGAGATCATGCGAAACCAACAGCATAAATGGATTACTTTGTATTCAAATATTATGTGATCAGGCCTTGTGTCATTACTGTTACTGCAACATCAATGACTGGAACCAAATGCCAAGTTTTCTTATCCAAGTCCTGTGGTCGTGGATAAGAAAGCCCTATTGCTGAGATAACCAACAGTCAGTTTTATCTGTGTTCACTCAGCCACCGATTAGGCACACACAGCTGGGGCGCTCTGCAAGAAAACTGATGAAATATTTTCCATGCCTCACACTCTAAACGCTGTATGCACCTCCGAGCACTGAGCATCTCTCAAAAGacaatcacaaaaaagaaaCTTCCAGCTAGGCATTCTTAGTCCATGTAGGAGGTGTCCATGCCCTCGGCGTCGGGGTGAAGCAGTCGTCCCGCCAAGCGCTCAATGTCATCAAGACTAAGTTGTCTAAGGGAGCGTTCATAGTccTAATAAGCTGTTCATGGACTTTTGCAGCATCTGATGGACTAAAGTGTCGAGCAAGAATAGTGGACACCGTCTGCCACACTCTTCCGTGCGTGGTGCTGctcccgctgctgctgctgctgctgctgctggcagccATCCCTGACGCTCCAGTCCTCTCCCCCACTGGACGGATAACCAGATTCAATTTAGCCTCTGGCCCAATGGAGTAATCACTCAGTCTGTGCTCCTGCAAGCGCTTTCCCTTTATAGAGCAACCGCTGCTGGTTCGCTGGTATGTTGAGACGTTCTGACACAAGTTCCTTCACTGAGGAGACCTTTTCATCTTCAGTCACCTGTACACTGCATTCTTTTCCTTGAAGCGGTTTCACGGTAAGGATCATTTTCGATgcgaataaaaaaacaacacgttCAAATGCTAAGCAACTAAATACACTCAAGTAACGTTATTTTTGCTAGCTCAAGATAGCCTCAGGAGTTCTTCCCTTGTCAACGGCCCATCTTCTTCTACCGCAGATGCgcggggctgctgctgctctcgtACGTCACTACTGCCACCTACTGGCCGGAG

Function

NR:

description
PREDICTED: proline-rich transmembrane protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90396 True 1232 lncRNA 0.46 4 37700514 37707458

Neighbor

gene id symbol gene type direction distance location
bmp1a NA coding upstream 48609 37585850 ~ 37651905 (+)
kansl3 kansl3,LOC102793526,LOC106579846 coding upstream 125057 37553378 ~ 37575457 (+)
LOC120560121 gfpt1,LOC104930651,LOC103362312 coding upstream 228713 37446217 ~ 37471801 (+)
nfu1 nfu1,LOC103362311,LOC106520164,LOC100703913,LOC107393744 coding upstream 256173 37437882 ~ 37444341 (+)
med22 med22,LOC104930648 coding upstream 268404 37422456 ~ 37432110 (+)
LOC120560164 LOC104964460,LOC103362321 coding downstream 753 37708211 ~ 37717629 (+)
acsl2 LOC104964461,LOC103362322 coding downstream 22368 37729826 ~ 37762215 (+)
ido1 LOC104931154 coding downstream 233461 37940919 ~ 37950699 (+)
stc1 LOC103362328,LOC104965051 coding downstream 307917 38015375 ~ 38027047 (+)
nkx2.7 NA coding downstream 342881 38050339 ~ 38053972 (+)
G67572 NA non-coding upstream 123550 37575516 ~ 37576964 (+)
G67570 NA non-coding upstream 153290 37545912 ~ 37547224 (+)
G67568 NA non-coding upstream 195786 37502702 ~ 37504728 (+)
G67563 NA non-coding upstream 221646 37478139 ~ 37478868 (+)
G67530 NA non-coding upstream 316692 37383588 ~ 37383822 (+)
G67639 bin3 non-coding downstream 61032 37768490 ~ 37781260 (+)
G67643 NA non-coding downstream 76216 37783674 ~ 37807644 (+)
G67661 NA non-coding downstream 115613 37823071 ~ 37823369 (+)
G67666 NA non-coding downstream 206175 37913633 ~ 37914035 (+)
G67669 NA non-coding downstream 214266 37921724 ~ 37936859 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 1207819 36241579 ~ 36492695 (+)
LOC120560081 NA other upstream 1219203 36477798 ~ 36481311 (+)
G67152 NA other upstream 1677250 35871423 ~ 36023264 (+)
G67145 NA other upstream 1846353 35841534 ~ 35854161 (+)
G67146 NA other upstream 1848458 35840874 ~ 35852056 (+)
LOC120560165 LOC104964460,LOC103362321 other downstream 10445 37717903 ~ 37728705 (+)
si:ch211-214j8.12 NA other downstream 602145 38309603 ~ 38323496 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other downstream 648145 38355603 ~ 38407523 (+)
G67824 NA other downstream 888353 38595811 ~ 38601821 (+)
G68023 NA other downstream 1702764 39410222 ~ 39461478 (+)

Expression


Co-expression Network