XLOC_005201 (mpp2b)


Basic Information

Item Value
gene id XLOC_005201
gene name mpp2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 10199219 ~ 10300101 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010027
AAAGCGCATCGCCGCAGGTCACATACGTGATGTAAAGCGGCTACTCAAATCTTCGTTTAGTTATCAGGCAATTACATATTAACCGAGCAGGTGGTCTGGCTCAAAGTGTTTCGTGTAATAACATCGCTGTCCTGTTAGACTCACTGGTTGCTGTGTTATCaggtgtgtgtctgagtgtggtAAATGAGACGAGAAATTCGTGATAATTTGAGCACCGATGGATTAAACGCGTAATTCAGCGAGCATCACGATGACCGCCGTCTGCAGAAAGTGAAAGACGAGCACATACTGCTGCTTTATTCATCCTGTCGGACATCATCATCACAGTTGGCTTCAGACAACTTTAATACGTGGACAAACACTCAAGAAAACAAAAATGCCAGTGGCATCTGCCAGCTCTGACTCAGCGATGCAGAGTCTTCTTGATACTCTGAGTGACAGTACCAGCTCCACCACAGCCAATGACCTGGACCTCATCTTCCTGAAAGGAATCATGGAGAGTCCAGTCTCTCGTGAGCACTATGAAGAGCCGAAGCTGGAGGCGGTGAGGGACAATAATGTGGAGCTGGTGCAGGACATCCTGAGAGACCTGAACACCCTTTCACCTGATAGTCCTGCGGCACATGAGCTCATCTGCATCCTCAAAGAGCCACACTTTCAGTCTTTACTTGAAACGCACGACTCTGTAGCATCCAAAAGCTATGAGACTCCTCCTCCCAGTCCTTGTGCATTTATGGACCCCGCGTTCAACAACCAGCCGGTGCCCCCTGATGCTGTGAGAATGGTGGGCATCCGCAAAGTGTCTGGAGAGCATCTGGGTGTGACATTTCGGGTGGAGGGTGGAGAGCTGGTGATTGCCCGGATCCTGCATGGGGGCATGATTGATCAGCAGGGTCTGCTGCACGTGGGTGACATCATCAAAGAGGTCAATGGAAAAGAGGTCGGGAGTGACCCCAAAGTCCTGCAGAACATGCTGAAAGAGTCCAGCGGGAGCGTGGTCCTCAAGATCCTGCCCAGCTACCAAGAACCACACACACCACGACAGGCTTTTGTAAAGTGTCACTTCGACTATGACCCCTCTCATGACAACCTGATCCCCTGTAAAGAGGCTGGACTTAAATTCAGCAGTGGAGACATCCTACAGATCTTCAACCAGGAGGACCCCAACTGgtggcagGCTTGTCATCTGGAAGGAGGCAGTGCTGGTCTGATCCCCAGTCAGCTGCTGGAGGAGAAGAGAAAAGCATTTGTCAAGAGAGATCTGGAGCTTGCAAGCACAGGGCCTCTGTGTGCAGGGATAGGCggtaagaagaagaagaagatgatgtACTTGACCACCAAGAACGCCGAGTTTGACCGCCATGAGTTGAGGATCTACGAGGAAGTGGCCAGGGTGCCTCCGTTCCGCAGGAAGACGCTGGTTCTGATTGGTGCTCAGGGCGTGGGGCGACGCAGCTTGAAAAACAAACTACTGGTGTCAGACCCGCACCGCTACGGAACCACCACACCCTACACATCTCGTAAACCCAAGGTGGATGAGAAAGAAGGGCAGATGTACCTGTTCATGTCCCGCAGCGAGATGGAAACTGACATTAAATGTGGTCGTTTCCTGGAGCACGGGGAGTATGATGGAAACCTGTATGGCACCAAGATCGACTCCATTCATGAGGTTGTGGACTCTGGAAAGATTTGCATTCTGGATGTCAATCCGCAGgcACTCAAAGTTTTGCGAACAGCCGAATTTCTTCCATATGTGGTGTTTATCGAAGCTCCAAACTTTGAGGTTCTTAAGGACATGAACAGATCTGCCATTGAAGCTGGTGTTGTGACTAAACAGATGACGGATTCAGAACTGAAACGGACGGTGGACGAGAGCGAAAGGATCCAGAGGGCGTACAGTCACTATTTTGACCTGAGCATAGTGAACGATAACCTGGACGGAGCGTACCGCAGCCTTAGACGGGCCCTGGACAGACTCAACACAGACCAGCAGTGGGTTCCCGTCAGCTGGGTCTTCTAAGTCTCCTTACAGTGGCCAGAGCTCCAGGTAACTGCTGTAATCTACATGAACTTGCCTGTTCCTTCAaatttttgcacaaaaaaatcaaataaaacgtGACAATACAACACAAagctagattattattattttgtaaagaaGCGAACTGATCTGTATATCTGTATTGTTCTAAAGGAGTTCTGTACAGTGCTGTATGTTTGTTATTCCTGTGAAAGTAGGGCTGTATATTTGTATAGAGACTGTAGAATATGTTTTAGCACCCTACGTTATGCTGAAGATATTCAGAGCCATGTTGGATGTATCGATGCTATATGATCATAGTGTTATGCAGGGATGGTTTAGTTTTGATGTATCAAACGCAGAACTGAAGAGTGTTTTGGCGTGTCTACGGTTGTCATATTCCTGTGCATGTTCTGGTTTGTTTGTATTCTTTCTCGTAACCTTTGTTGGTACTTTATATTTCTGTTCAAAAACGGCAACAATGATGTGTATTATTTGATTAGTCTGATggactaaaatacaaaaaaaaagatctaaTTTTATCATTCCAATCCAGCAATTCTAGAATCCTTCACTGTGATCAATCGCAGCGCTCTGCAGTCGTATATTTTTCTATAATGACGCTGTACTGTATAATTGACCGTTGCCCAAGGGAAGGGAATCCCTATAGCTGTACTAGTTTCACCAAGTCTCTCATGTTACTCCACACTCTTTCTtctcaaataataaaatactatcaactcaaa
>TCONS_00010028
ATGCCAGTGGCATCTGCCAGCTCTGACTCAGCGATGCAGAGTCTTCTTGATACTCTGAGTGACAGTACCAGCTCCACCACAGCCAATGACCTGGACCTCATCTTCCTGAAAGGAATCATGGAGAGTCCAGTCTCTCGTGAGCACTATGAAGAGCCGAAGCTGGAGGCGGTGAGGGACAATAATGTGGAGCTGGTGCAGGACATCCTGAGAGACCTGAACACCCTTTCACCTGATAGTCCTGCGGCACATGAGCTCATCTGCATCCTCAAAGAGCCACACTTTCAGTCTTTACTTGAAACGCACGACTCTGTAGCATCCAAAAGCTATGAGACTCCTCCTCCCAGTCCTTGTGCATTTATGGACCCCGCGTTCAACAACCAGCCGGTGCCCCCTGATGCTGTGAGAATGGTGGGCATCCGCAAAGTGTCTGGAGAGCATCTGGGTGTGACATTTCGGGTGGAGGGTGGAGAGCTGGTGATTGCCCGGATCCTGCATGGGGGCATGATTGATCAGCAGGGTCTGCTGCACGTGGGTGACATCATCAAAGAGGTCAATGGAAAAGAGGTCGGGAGTGACCCCAAAGTCCTGCAGAACATGCTGAAAGAGTCCAGCGGGAGCGTGGTCCTCAAGATCCTGCCCAGCTACCAAGAACCACACACACCACGACAGGCTTTTGTAAAGTGTCACTTCGACTATGACCCCTCTCATGACAACCTGATCCCCTGTAAAGAGGCTGGACTTAAATTCAGCAGTGGAGACATCCTACAGATCTTCAACCAGGAGGACCCCAACTGgtggcagGCTTGTCATCTGGAAGGAGGCAGTGCTGGTCTGATCCCCAGTCAGCTGCTGGAGGAGAAGAGAAAAGCATTTGTCAAGAGAGATCTGGAGCTTGCAAGCACAGGGCCTCTGTGTGCAGGGATAGGCggtaagaagaagaagaagatgatgtACTTGACCACCAAGAACGCCGAGTTTGACCGCCATGAGTTGAGGATCTACGAGGAAGTGGCCAGGGTGCCTCCGTTCCGCAGGAAGACGCTGGTTCTGATTGGTGCTCAGGGCGTGGGGCGACGCAGCTTGAAAAACAAACTACTGGTGTCAGACCCGCACCGCTACGGAACCACCACACCCTACACATCTCGTAAACCCAAGGTGGATGAGAAAGAAGGGCAGATGTACCTGTTCATGTCCCGCAGCGAGATGGAAACTGACATTAAATGTGGTCGTTTCCTGGAGCACGGGGAGTATGATGGAAACCTGTATGGCACCAAGATCGACTCCATTCATGAGGTTGTGGACTCTGGAAAGATTTGCATTCTGGATGTCAATCCGCAGgcACTCAAAGTTTTGCGAACAGCCGAATTTCTTCCATATGTGGTGTTTATCGAAGCTCCAAACTTTGAGGTTCTTAAGGACATGAACAGATCTGCCATTGAAGCTGGTGTTGTGACTAAACAGATGACGGATTCAGAACTGAAACGGACGGTGGACGAGAGCGAAAGGATCCAGAGGGCGTACAGTCACTATTTTGACCTGAGCATAGTGAACGATAACCTGGACGGAGCGTACCGCAGCCTTAGACGGGCCCTGGACAGACTCAACACAGACCAGCAGTGGGTTCCCGTCAGCTGGGTCTTCTAAGTCTCCTTACAGTGGCCAGAGCTCCAGGTAACTGCTGTA
>TCONS_00010029
TGGAGACATCCTACAGATCTTCAACCAGGAGGACCCCAACTGgtggcagGCTTGTCATCTGGAAGGAGGCAGTGCTGGTCTGATCCCCAGTCAGCTGCTGGAGGAGAAGAGAAAAGCATTTGTCAAGAGAGATCTGGAGCTTGCAAGCACAGGGATAGGCggtaagaagaagaagaagatgatgtACTTGACCACCAAGAACGCCGAGTTTGACCGCCATGAGTTGAGGATCTACGAGGAAGTGGCCAGGGTGCCTCCGTTCCGCAGGAAGACGCTGGTTCTGATTGGTGCTCAGGGCGTGGGGCGACGCAGCTTGAAAAACAAACTACTGGTGTCAGACCCGCACCGCTACGGAACCACCACACCCTACACATCTCGTAAACCCAAGGTGGATGAGAAAGAAGGGCAGATGTACCTGTTCATGTCCCGCAGCGAGATGGAAACTGACATTAAATGTGGTCGTTTCCTGGAGCACGGGGAGTATGATGGAAACCTGTATGGCACCAAGATCGACTCCATTCATGAGGTTGTGGACTCTGGAAAGATTTGCATTCTGGATGTCAATCCGCAGgcACTCAAAGTTTTGCGAACAGCCGAATTTCTTCCATATGTGGTGTTTATCGAAGCTCCAAACTTTGAGGTTCTTAAGGACATGAACAGATCTGCCATTGAAGCTGGTGTTGTGACTAAACAGATGACGGATTCAGAACTGAAACGGACGGTGGACGAGAGCGAAAGGAT
>TCONS_00010030
GCTTTTGTAAAGTGTCACTTCGACTATGACCCCTCTCATGACAACCTGATCCCCTGTAAAGAGGCTGGACTTAAATTCAGCAGTGGAGACATCCTACAGATCTTCAACCAGGAGGACCCCAACTGgtggcagGCTTGTCATCTGGAAGGAGGCAGTGCTGGTCTGATCCCCAGTCAGCTGCTGGAGGAGAAGAGAAAAGCATTTGTCAAGAGAGATCTGGAGCTTGCAAGCACAGGGATAGGCggtaagaagaagaagaagatgatgtACTTGACCACCAAGAACGCCGGTAAAGACGACTGCTCCAGGGCATGTGCCGTATACTCTCGTTCTCTGTTGTGTCTCGTATTGAAGTCTGCTTGTTAACATATTTCATGATAATGGGCTTAAAGTCAGTTCCATTTCAGTAAAAGAagaattgcattttatttaaagaaaatgaaagCTGTGGTACTGCATTCTCCAGGAAAAGGTCACTGTagaaaaaatatctgttaattaactgtttccacattttgtgatt

Function

symbol description
mpp2b Is expressed in basal plate midbrain region; nervous system; and pronephric duct. Orthologous to human MPP2 (membrane palmitoylated protein 2).

GO:

id name namespace
GO:0008150 biological_process biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-040704-70 Is expressed in basal plate midbrain region; nervous system; and pronephric duct. Orthologous to human MPP2 (membrane palmitoylated protein 2).

Ensembl:

ensembl_id ENSDARG00000010957

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010027 False 2766 mRNA 0.47 13 10199219 10300101
TCONS_00010028 False 1683 mRNA 0.53 12 10199926 10275320
TCONS_00010029 False 741 mRNA 0.51 7 10200101 10220036
TCONS_00010030 True 523 lncRNA 0.44 3 10215330 10220119

Neighbor

gene id symbol gene type direction distance location
XLOC_005200 NA coding downstream 69317 10124660 ~ 10129902 (-)
XLOC_005199 BX928755.1 coding downstream 135551 10060636 ~ 10063668 (-)
XLOC_005198 ngfrb coding downstream 160349 9949941 ~ 10038870 (-)
XLOC_005197 prdm9 coding downstream 402982 9781524 ~ 9796237 (-)
XLOC_005196 AL732629.2 coding downstream 528082 9669927 ~ 9671137 (-)
XLOC_005202 pyyb coding upstream 4334 10304435 ~ 10315039 (-)
XLOC_005203 tut1 coding upstream 37573 10337674 ~ 10352001 (-)
XLOC_005204 ndc80 coding upstream 53232 10353333 ~ 10365969 (-)
XLOC_005205 mki67 coding upstream 66516 10366617 ~ 10381282 (-)
XLOC_005206 eef2k coding upstream 81856 10381957 ~ 10409970 (-)
XLOC_005195 AL732629.1 non-coding downstream 550874 9648228 ~ 9648345 (-)
XLOC_005187 CR457459.1 non-coding downstream 853734 9345364 ~ 9345485 (-)
XLOC_005214 NA non-coding upstream 469030 10769131 ~ 10772946 (-)
XLOC_005222 BX572641.1 non-coding upstream 2035115 12335216 ~ 12335331 (-)
XLOC_005224 NA non-coding upstream 2802765 13102866 ~ 13106223 (-)
XLOC_005237 NA non-coding upstream 3838185 14138286 ~ 14144159 (-)
XLOC_005240 NA non-coding upstream 4539686 14839787 ~ 14840559 (-)

Expression


Co-expression Network