pigh (pigh)


Basic Information

Item Value
gene id pigh
gene name pigh
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 18130872 ~ 18140151 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026948094.2
TTTGAGAATGCGTACAACTCAATTTCCCAGAATGCAACGCGCACTTGTGAAGGTCACGCAGCCATCGTTTATTGGTGCGCACCGCTTTCTTTCTGCAAGGTCGCGTTTTGGCCAGGTTTTGTATCCAACATGGCTGAGAAGGAAGAGTTCACGGACATCAGAGGGAAGCCGATTAAACTATCCTGCCAGAATTATTCTCCTTTGTGCAGAGAGTTCACCATCAGCTCCTGTAAGCTGTCTCTGGTCAGGGTGATGGTGCTGACCTGCGGCGTGTGGCTGCTCGCTTATGCAGGCTTCTACCTGACACAGAACACGGCGGTTCTGTCCGCCGCCATCTTCGTGACTTTATCAGGAATGCTGCTGCATGTTCACTTCGTAAAGGTGGACCACGAGACGCTGCTCATCGTCGGCTCGCTCGGCGTCCAGCTGTCCTCCGCTTACGCCTCGGGCCGGGAGAGCACCACCTTCATCGAGATGAGCAGGATAAAAGACATCGTCATTAACGAGGCCATCCACATGcaaacgATCATCTACTACCTGTGCATTTTGCTGAAGGATCCTGCAGAGCCTGATGGAGTCAGCAGTGTTGTCCCGCTTTTCCagAGCTCAAAGCCGAGGCTGAACTGCCTggtgcaggtgtacaggagCTGTCAGGAGATAATTGGACAGACACGATGACGACGCTGACGGAGGAGCTGAAGGTATAAATGTCAGCGCGTCTGGTCCTGCCACATGCTCCGAATATCTCTGCGATTACTCTCTAATTTCCTGAATATTTTTAGAGccttttttttgtgtctcttCAGCAGAACCCTTTGACAAAAGGCTTTGAAAAACCCTTTCAGAGTCTCCAGATGAACCGTGAAACTTCAGTCTAAATCAGTGTTTCTACTCCATTGTGCTGTATTTAAAGGTATTCTCACCACGTGGTGTGATGTGGATTAAAGATCTAAGTTTAGATATTTCTCAATAAAAGTCTTGTGATATCGTGTA
>XM_034313424.1
CTCAATTTCCCAGAATGCAACGCGCACTTGTGAAGGTCACGCAGCCATCGTTTATTGGTGCGCACCGCTTTCTTTCTGCAAGgcatGTCGCGTTTTGGCCAGGTTTTGTATCCAACATGGCTGAGAAGGAAGAGTTCACGGACATCAGAGGGAAGCCGATTAAACTATCCTGCCAGAATTATTCTCCTTTGTGCAGAGAGTTCACCATCAGCTCCTGTAAGCTGTCTCTGGTCAGGGTGATGGTGCTGACCTGCGGCGTGTGGCTGCTCGCTTATGCAGGCTTCTACCTGACACAGAACACGGCGGTTCTGTCCGCCGCCATCTTCGTGACTTTATCAGGAATGCTGCTGCATGTTCACTTCGTAAAGGTGGACCACGAGACGCTGCTCATCGTCGGCTCGCTCGGCGTCCAGCTGTCCTCCGCTTACGCCTCGGGCCGGGAGAGCACCACCTTCATCGAGATGAGCAGGATAAAAGACATCGTCATTAACGAGGCCATCCACATGcaaacgATCATCTACTACCTGTGCATTTTGCTGAAGGATCCTGCAGAGCCTGATGGAGTCAGCAGTGTTGTCCCGCTTTTCCagAGCTCAAAGCCGAGGCTGAACTGCCTggtgcaggtgtacaggagCTGTCAGGAGATAATTGGACAGACACGATGACGACGCTGACGGAGGAGCTGAAGAACCCTTTGACAAAAGGCTTTGAAAAACCCTTTCAGAGTCTCCAGATGAACCGTGAAACTTCAGTCTAAATCAGTGTTTCTACTCCATTGTGCTGTATTTAAAGGTATTCTCACCACGTGGTGTGATGTGGATTAAAGATCTAAGTTTAGATATTTCTCAATAAAAGTCTTGTGATATCGTGTA
>XM_034313425.1
CTCAATTTCCCAGAATGCAACGCGCACTTGTGAAGGTCACGCAGCCATCGTTTATTGGTGCGCACCGCTTTCTTTCTGCAAGgcatGTCGCGTTTTGGCCAGGTTTTGTATCCAACATGGCTGAGAAGGAAGAGTTCACGGACATCAGAGGGAAGCCGATTAAACTATCCTGCCAGAATTATTCTCCTTTGTGCAGAGAGTTCACCATCAGCTCCTGTAAGCTGTCTCTGGTCAGGGTGATGGTGCTGACCTGCGGCGTGTGGCTGCTCGCTTATGCAGGCTTCTACCTGACACAGAACACGGCGGTTCTGTCCGCCGCCATCTTCGTGACTTTATCAGGAATGCTGCTGCATGTTCACTTCGTAAAGGTGGACCACGAGACGCTGCTCATCGTCGGCTCGCTCGGCGTCCAGCTGTCCTCCGCTTACGCCTCGGGCCGGGAGAGCACCACCTTCATCGAGATGAGCAGGATAAAAGACATCGTCATTAACGAGGCCATCCACATGcaaacgATCATCTACTACCTGTGCATTTTGCTGAAGGATCCTGCAGAGCCTGATGGAGTCAGCAGTGTTGTCCCGCTTTTCCagAGCTCAAAGCCGAGGCTGAACTGCCTggtgcaggtgtacaggagCTGTCAGGAGATAATTGGACAGACACGATGACGACGCTGACGGAGGAGCTGAAGCAGAACCCTTTGACAAAAGGCTTTGAAAAACCCTTTCAGAGTCTCCAGATGAACCGTGAAACTTCAGTCTAAATCAGTGTTTCTACTCCATTGTGCTGTATTTAAAGGTATTCTCACCACGTGGTGTGATGTGGATTAAAGATCTAAGTTTAGATATTTCTCAATAAAAGTCTTGTGATATCGTGTA
>XM_034313426.1
ATGCGTACAACTCAATTTCCCAGAATGCAACGCGCACTTGTGAAGGTCACGCAGCCATCGTTTATTGGTGCGCACCGCTTTCTTTCTGCAAGgcatGTCGCGTTTTGGCCAGGTTTTGTATCCAACATGGCTGAGAAGGAAGAGTTCACGGACATCAGAGGGAAGCCGATTAAACTATCCTGCCAGAATTATTCTCCTTTGTGCAGAGAGTTCACCATCAGCTCCTGTAAGCTGTCTCTGGTCAGGGTGATGGTGCTGACCTGCGGCGTGTGGCTGCTCGCTTATGCAGGCTTCTACCTGACACAGAACACGGCGGTTCTGTCCGCCGCCATCTTCGTGACTTTATCAGGAATGCTGCTGCATGTTCACTTCGTAAAGGTGGACCACGAGACGCTGCTCATCGTCGGCTCGCTCGGCGTCCAGCTGTCCTCCGCTTACGCCTCGGGCCGGGAGAGCACCACCTTCATCGAGATGAGCAGGATAAAAGACATCGTCATTAACGAGGCCATCCACATGcaaacgATCATCTACTACCTGTGCATTTTGCTGAAGGATCCTGCAGAGCCTGATGGAGTCAGCAGTGTTGTCCCGCTTTTCCagAGCTCAAAGCCGAGGCTGAACTGCCTggtgcaggtgtacaggagCTGTCAGGAGATAATTGGACAGACACGATGACGACGCTGACGGAGGAGCTGAAGGTATAAATGTCAGCGCGTCTGGTCCTGCCACATGCTCCGAATATCTCTGCGATTACTCTCTAATTTCCTGAATATTTTTAGAGccttttttttgtgtctcttCAGCAGAACCCTTTGACAAAAGGCTTTGAAAAACCCTTTCAGAGTCTCCAGATGAACCGTGAAACTTCAGTCTAAATCAGTGTTTCTACTCCATTGTGCTGTATTTAAAGGTATTCTCACCACGTGGTGTGATGTGGATTAAAGATCTAAGTTTAGATATTTCTCAATAAAAGTCTTGTGATATCGTGTA

Function

symbol description
pigh Predicted to enable phosphatidylinositol N-acetylglucosaminyltransferase activity. Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex. Is expressed in nervous system; pancreatic system; and pronephric duct. Orthologous to human PIGH (phosphatidylinositol glycan anchor biosynthesis class H).

NR:

description
phosphatidylinositol N-acetylglucosaminyltransferase subunit H

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity molecular_function

KEGG:

id description
K03858 PIGH, GPI15; phosphatidylinositol N-acetylglucosaminyltransferase subunit H

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026948094.2 True 993 mRNA 0.49 5 18130872 18140151
XM_034313424.1 False 872 mRNA 0.50 6 18130889 18140151
XM_034313425.1 False 875 mRNA 0.50 6 18130889 18140151
XM_034313426.1 False 990 mRNA 0.49 5 18130879 18140151

Neighbor

gene id symbol gene type direction distance location
wdr21 dcaf4,LOC107602090,LOC107659175,LOC107562700 coding upstream 15936 18106676 ~ 18114936 (+)
rgs6 rgs6,LOC108424512,LOC108257637,LOC107659172,LOC107602058,LOC107721319 coding upstream 63439 17956904 ~ 18067433 (+)
rab15 rab15,LOC107668202,LOC107671782,LOC106571087 coding upstream 288468 17827153 ~ 17842404 (+)
susd6 susd6 coding upstream 372184 17719542 ~ 17758688 (+)
zbtb2b zbtb2,LOC108424498 coding upstream 595515 17523660 ~ 17535357 (+)
vps18 vps18,LOC107739368,LOC107602125,LOC107668247,LOC107659178 coding downstream 30452 18170603 ~ 18184297 (+)
zbtb25 zbtb25 coding downstream 478326 18618477 ~ 18625852 (+)
prph2lb LOC108258119,LOC108424527,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225 coding downstream 705509 18845660 ~ 18849892 (+)
serpina10a LOC108258118 coding downstream 711480 18851631 ~ 18857872 (+)
LOC113547694 LOC108257617 coding downstream 754925 18895076 ~ 18904325 (+)
G297558 NA non-coding upstream 132641 17910989 ~ 17998231 (+)
G297515 NA non-coding upstream 270183 17802945 ~ 17860689 (+)
G297531 NA non-coding upstream 305476 17824665 ~ 17825396 (+)
G297492 NA non-coding upstream 417774 17712804 ~ 17713098 (+)
G297469 NA non-coding upstream 441447 17677389 ~ 17689425 (+)
G297631 NA non-coding downstream 46153 18186304 ~ 18187136 (+)
G297632 chac1 non-coding downstream 110131 18250282 ~ 18252424 (+)
G297650 NA non-coding downstream 113275 18253426 ~ 18253628 (+)
G297973 NA non-coding downstream 435841 18575992 ~ 18576356 (+)
G298036 NA non-coding downstream 588823 18728974 ~ 18729402 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107756605,LOC107659170 other upstream 188694 17854724 ~ 17942178 (+)
max max,LOC107721316 other upstream 323695 17789100 ~ 17807177 (+)
syne1a LOC108257639 other upstream 651601 17252099 ~ 17479271 (+)
G296863 LOC108257755 other upstream 1318079 16812117 ~ 16812793 (+)
afdna afdn other upstream 1323581 16680096 ~ 16807291 (+)
ino80 ino80,LOC107668207,LOC107739367,LOC107721325 other downstream 45876 18186027 ~ 18246057 (+)
syndig1l syndig1l,LOC107562693,LOC107659181,LOC107602907,LOC107711667 other downstream 355524 18495675 ~ 18528199 (+)
itpk1a itpk1,LOC108257830 other downstream 955801 19095952 ~ 19137613 (+)
G298379 NA other downstream 1149834 19289985 ~ 19290539 (+)
G298409 NA other downstream 1261398 19401549 ~ 19546734 (+)

Expression


Co-expression Network