max (max,LOC107721316)


Basic Information

Item Value
gene id max
gene name max,LOC107721316
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 17789100 ~ 17807177 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU352289
GTCACGTGTGGCGCAGCTCGCGCATCGCACGTCGCCTGGCTGTTGACTGTTGATCTGATTTGATCTTCACCGCTTCATGGTTTCCAAACAGCTTTCCCATTAAAAACCCGACCGAAGAATGAGCGACAACGATGACATCGAGGTTGACAGTGACGCAGACAAACGAGCTCATCACAATGCACTGGAGCGCAAACGCAGGGACCACATCAAAGACAGCTTTCACAGCCTCCGAGACTCTGTGCCCGCCTTACAGGGGGAAAAGGCCTCCCGAGCTCAAATCCT
>TU352290
GTCACGTGTGGCGCAGCTCGCGCATCGCACGTCGCCTGGCTGTTGACTGTTGATCTGATTTGATCTTCACCGCTTCATGGTTTCCAAACAGCTTTCCCATTAAAAACCCGACCGAAGAATGAGCGACAACGATGACATCGAGGTTGACAGTGACGAAGAATCGCCGAGGTTTCATTCTGTGGCAGACAAACGAGCTCATCACAATGCACTGGAGCGCAAACGCAGGGACCACATCAAAGACAGCTTTCACAGCCTCCGAGACTCTGTGCCCGCCTTACAGGGGGAAAAGGCCTCCCGAGCTCAAATCCT
>TU352300
GCGACAGAACGCTCTGCTGGAACAGCAAGTTCGAGCACTGGAGAAGGTGAAGGGGACCACACAGCTGCAGGGCGGCTACTCCTCCTCAGACAGCAGCCTGTACACGAACCCTAAAGGCAGCGCCGTGTCGGCCTTCGACGGCGGCTCCGACTCCAGCTCCGAGTCAGAACCCGAGGAGCCGCCCACGAGGAAGAAGCTCCGCCAGGAGGCCAGCTAAGAGCAGCACCTCCTCCCGCTCTTCCAGCTTCTCCTCCGCTGCTCCCTCTTCCTCAGTGTGCACCAATCAGAGACTCCACAACTTCCTGTTTCGTGTCTTTTACAGGCTTCCCAGATGCCGGCCCACACCCTGACCCAGAACCAGACCCAGtcccagaaccagaaccagaaccagaccCACACCCAGGGAGCTAGGAGAGAAGGACTCGTAGCacacgtctctctctcctccgtcctccctccgtctctctctcgGGCCGGCTCAGCAGTAACAAGCAGCATCTCAAACCTACAACGAGGCAGCTTCGTGATTTACGGACTTGGCGCTTCTTCCGTACGTCCGTCCGTCGGTACGACGTGGCGAAGGAAGCGTACAGCTCCGGGCACTGCTCAATGTTTCCTTTTGTGTTCTctttttgttatatatgtttttaaaaaaaaatcatcataatcTAAGTACTTACCCTTAATGTGACTGTTCCAAAGGAGCAGTTCATCTTTCTAAATATTTGTACTTTTCCACAAAAGAATGTGAGCGTACGTGAACGCCGTTATTCCGAACGCAGACCGATCGAATCTGATCAAATCGCTGAtaaatttggtttaaaaaaaaaattaaacaaatgttctTAGAGTTGTTGTGTTTTAGCGTGAATTAGTGAGTGAGTTTAGATagctgaaagttttttttatataaaggaatacattaatttatattctcccctatatatatatattatacatactgGGTTTTGtacttttcattcaattttgaggaaattaatttaataaaatgttttttttgttgtttttttttccccaccacagttcagaaaatgttaaaagagGTCCACCTCTTCAGggaaaacaaaatgtacatgCTGATTGATTTTTAATTCCCATCCACTCCTTTTAAATTTTGCGTGTTTATAAGTTTTGTGTAAGtatatattttatccatttttccCTCATAGCACATACTTCAATAGCTCTTTCCACAGAATCCATTCCACGGAAAAGACCGGTATGTCGTACATACTGCCAATACATCGTCTTGCAAATTGAGGCCTACCTTTAACTACGagactataaataaacaaactatttt
>XM_034313917.1
CGACATAGAATGTCCGCGTGTAGGCGAGTGAGTCACGTGTGGCGCAGCTCGCGCATCGCACGTCGCCTGGCTGTTGACTGTTGATCTGATTTGATCTTCACCGCTTCATGGTTTCCAAACAGCTTTCCCATTAAAAACCCGACCGAAGAATGAGCGACAACGATGACATCGAGGTTGACAGTGACGAAGAATCGCCGAGGTTTCATTCTGTGGCAGACAAACGAGCTCATCACAATGCACTGGAGCGCAAACGCAGGGACCACATCAAAGACAGCTTTCACAGCCTCCGAGACTCTGTGCCCGCCTTACAGGGGGAAAAGGCCTCCCGAGCTCAAATCCTTTTGTTTCCACAGAGTACATCTGTTCATGAGGCAGGAAAAAGCCACTCACCAGCAGCCTCTGGGCGACAGAACGCTCTGCTGGAACAGCAAGTTCGAGCACTGGAGAAGGTGAAGGGGACCACACAGCTGCAGGGCGGCTACTCCTCCTCAGACAGCAGCCTGTACACGAACCCTAAAGGCAGCGCCGTGTCGGCCTTCGACGGCGGCTCCGACTCCAGCTCCGAGTCAGAACCCGAGGAGCCGCCCACGAGGAAGAAGCTCCGCCAGGAGGCCAGCTAAGAGCAGCACCTCCTCCCGCTCTTCCAGCTTCTCCTCCGCTGCTCCCTCTTCCTCAGTGTGCACCAATCAGAGACTCCACAACTTCCTGTTTCGTGTCTTTTACAGGCTTCCCAGATGCCGGCCCACACCCTGACCCAGAACCAGACCCAGtcccagaaccagaaccagaaccagaccCACACCCAGGGAGCTAGGAGAGAAGGACTCGTAGCacacgtctctctctcctccgtcctccctccgtctctctctcgGGCCGGCTCAGCAGTAACAAGCAGCATCTCAAACCTACAACGAGGCAGCTTCGTGATTTACGGACTTGGCGCTTCTTCCGTACGTCCGTCCGTCGGTACGACGTGGCGAAGGAAGCGTACAGCTCCGGGCACTGCTCAATGTTTCCTTTTGTGTTCTctttttgttatatatgtttttaaaaaaaaatcatcataatcTAAGTACTTACCCTTAATGTGACTGTTCCAAAGGAGCAGTTCATCTTTCTAAATATTTGTACTTTTCCACAAAAGAATGTGAGCGTACGTGAACGCCGTTATTCCGAACGCAGACCGATCGAATCTGATCAAATCGCTGAtaaatttggtttaaaaaaaaaattaaacaaatgttctTAGAGTTGTTGTGTTTTAGCGTGAATTAGTGAGTGAGTTTAGATagctgaaagttttttttatataaaggaatacattaatttatattctcccctatatatatatattatacatactgGGTTTTGtacttttcattcaattttgaggaaattaatttaataaaatgttttttttgttgtttttttttccccaccacagttcagaaaatgttaaaagagGTCCACCTCTTCAGggaaaacaaaatgtacatgCTGATTGATTTTTAATTCCCATCCACTCCTTTTAAATTTTGCGTGTTTATAAGTTTTGTGTAAGtatatattttatccatttttccCTCATAGCACATACTTCAATAGCTCTTTCCACAGAATCCATTCCACGGAAAAGACCGGTATGTCGTACATACTGCCAATACATCGTCTTGCAAATTGAGGCCTACCTTTAACTACGagactataaataaacaaactattttatcctttt

Function

symbol description
max Contributes to transcription cis-regulatory region binding activity. Acts upstream of or within determination of ventral identity and hemopoiesis. Part of SMAD protein complex. Is expressed in central nervous system. Human ortholog(s) of this gene implicated in lung small cell carcinoma and pheochromocytoma. Orthologous to human MAX (MYC associated factor X).

NR:

description
PREDICTED: protein max isoform X1

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0071339 MLL1 complex cellular_component
GO:0003677 DNA binding molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K04453 MAX; Max protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU352289 False 282 lncRNA 0.54 3 17789131 17804155
TU352290 False 309 lncRNA 0.53 4 17789131 17804155
TU352300 False 1324 TUCP 0.44 2 17804219 17807169
XM_034313917.1 True 1735 mRNA 0.46 5 17789100 17807177

Neighbor

gene id symbol gene type direction distance location
susd6 susd6 coding upstream 30412 17719542 ~ 17758688 (+)
zbtb2b zbtb2,LOC108424498 coding upstream 253743 17523660 ~ 17535357 (+)
nrbp1 nrbp1,LOC107659221,LOC107665360,LOC107737320,LOC103372645 coding upstream 573663 17196227 ~ 17215437 (+)
znf106b NA coding upstream 624373 17155779 ~ 17164727 (+)
ttbk2b LOC108258239,LOC108424489 coding upstream 641096 17129944 ~ 17148004 (+)
rab15 rab15,LOC107668202,LOC107671782,LOC106571087 coding downstream 19976 17827153 ~ 17842404 (+)
rgs6 rgs6,LOC108424512,LOC108257637,LOC107659172,LOC107602058,LOC107721319 coding downstream 149727 17956904 ~ 18067433 (+)
wdr21 dcaf4,LOC107602090,LOC107659175,LOC107562700 coding downstream 299499 18106676 ~ 18114936 (+)
pigh pigh coding downstream 323695 18130872 ~ 18140151 (+)
vps18 vps18,LOC107739368,LOC107602125,LOC107668247,LOC107659178 coding downstream 363426 18170603 ~ 18184297 (+)
G297492 NA non-coding upstream 76002 17712804 ~ 17713098 (+)
G297469 NA non-coding upstream 99675 17677389 ~ 17689425 (+)
G297223 NA non-coding upstream 131051 17608598 ~ 17658049 (+)
G297176 NA non-coding upstream 252301 17536485 ~ 17536799 (+)
G297152 armt1 non-coding upstream 275294 17510956 ~ 17513806 (+)
G297531 NA non-coding downstream 17488 17824665 ~ 17825396 (+)
G297558 NA non-coding downstream 103812 17910989 ~ 17998231 (+)
G297631 NA non-coding downstream 379127 18186304 ~ 18187136 (+)
G297632 chac1 non-coding downstream 443105 18250282 ~ 18252424 (+)
G297650 NA non-coding downstream 446249 18253426 ~ 18253628 (+)
syne1a LOC108257639 other upstream 309829 17252099 ~ 17479271 (+)
G296863 LOC108257755 other upstream 976307 16812117 ~ 16812793 (+)
afdna afdn other upstream 981809 16680096 ~ 16807291 (+)
LOC113531918 LOC108257642 other upstream 1170662 16601704 ~ 16618438 (+)
G296825 NA other upstream 1191313 16597150 ~ 16597787 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107756605,LOC107659170 other downstream 47547 17854724 ~ 17942178 (+)
ino80 ino80,LOC107668207,LOC107739367,LOC107721325 other downstream 378850 18186027 ~ 18246057 (+)
syndig1l syndig1l,LOC107562693,LOC107659181,LOC107602907,LOC107711667 other downstream 688498 18495675 ~ 18528199 (+)
itpk1a itpk1,LOC108257830 other downstream 1288775 19095952 ~ 19137613 (+)
G298379 NA other downstream 1482808 19289985 ~ 19290539 (+)

Expression


Co-expression Network