Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034313425.1 |
| length | 875 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 6 |
| gene id | pigh |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 18130872 ~ 18140151 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0017176 | phosphatidylinositol N-acetylglucosaminyltransferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU352340 | lncRNA | upstream | 132658 | 17910989 ~ 17998231 (+) | True | G297558 |
| TU352296 | lncRNA | upstream | 226156 | 17854724 ~ 17904733 (+) | False | sipa1l1 |
| TU352297 | lncRNA | upstream | 226156 | 17854724 ~ 17904733 (+) | False | sipa1l1 |
| TU352298 | lncRNA | upstream | 226156 | 17854724 ~ 17904733 (+) | False | sipa1l1 |
| TU352293 | lncRNA | upstream | 270200 | 17802945 ~ 17860689 (+) | True | G297515 |
| TU352441 | lncRNA | downstream | 46153 | 18186304 ~ 18187136 (+) | True | G297631 |
| TU352442 | lncRNA | downstream | 110131 | 18250282 ~ 18252424 (+) | True | G297632 |
| TU352461 | lncRNA | downstream | 113275 | 18253426 ~ 18253628 (+) | True | G297650 |
| TU352823 | lncRNA | downstream | 435841 | 18575992 ~ 18576356 (+) | True | G297973 |
| TU352899 | lncRNA | downstream | 588823 | 18728974 ~ 18729402 (+) | True | G298036 |
| XM_034313463.1 | mRNA | upstream | 15953 | 18106676 ~ 18114936 (+) | False | wdr21 |
| XM_034313462.1 | mRNA | upstream | 15953 | 18106692 ~ 18114936 (+) | True | wdr21 |
| XM_034313599.1 | mRNA | upstream | 63456 | 17956904 ~ 18067433 (+) | True | rgs6 |
| XM_034313642.1 | mRNA | upstream | 188711 | 17854779 ~ 17942178 (+) | False | sipa1l1 |
| XM_026948137.2 | mRNA | downstream | 30452 | 18170603 ~ 18184297 (+) | True | vps18 |
| XM_034313659.1 | mRNA | downstream | 45876 | 18186027 ~ 18246057 (+) | True | ino80 |
| XM_026948143.2 | mRNA | downstream | 355524 | 18495675 ~ 18528199 (+) | True | syndig1l |
| XM_026948153.2 | mRNA | downstream | 478326 | 18618477 ~ 18625852 (+) | False | zbtb25 |
| XM_026948151.2 | mRNA | downstream | 479709 | 18619860 ~ 18625852 (+) | True | zbtb25 |
| XR_004580105.1 | other | upstream | 193275 | 17854779 ~ 17937614 (+) | False | sipa1l1 |
| TU352300 | other | upstream | 323720 | 17804219 ~ 17807169 (+) | False | max |
| TU351537 | other | upstream | 1318096 | 16812117 ~ 16812793 (+) | True | G296863 |
| TU351482 | other | upstream | 1533102 | 16597150 ~ 16597787 (+) | True | G296825 |
| TU351185 | other | upstream | 1815763 | 16314263 ~ 16315126 (+) | True | G296562 |
| TU352440 | other | downstream | 45958 | 18186109 ~ 18195131 (+) | False | ino80 |
| TU352782 | other | downstream | 355632 | 18495783 ~ 18504263 (+) | False | syndig1l |
| TU353310 | other | downstream | 1149834 | 19289985 ~ 19290539 (+) | True | G298379 |
| XR_004580076.1 | other | downstream | 1189074 | 19329225 ~ 19329925 (+) | True | LOC117599671 |
| TU353352 | other | downstream | 1384502 | 19524653 ~ 19546734 (+) | False | G298409 |
