angel1 (angel1)


Basic Information

Item Value
gene id angel1
gene name angel1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 9825172 ~ 9835028 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026934457.2
GCACTTGTATTCGCAGTGCACTGAGACGCGCGCGCGTGCGCACACGCGCTAAACAGTCACCAGGACAGCgggatgaataaagtgttttttttttttctgagattatTTTCTTATCACACTAATAGTTGAGCCATGATTGGGAGCCTTATTTATTATGGGCTGTACCCGCTAACCCAGCTCTTCATTAGGCTCTCAGACTCTTGGTGGAAACGTCATCCAGTGATCATTCATGGCAAagcagtgtgtgatggtggtgcACGTTCTTGCAGAAGGCTTAATGAGCAGCAGGCTGCTTTGTTGGATGAGTGGTGCAACGCTGGACCTGAAGCCTCAGAAACCCCTACGTGTACTCAGCGAGAAAGGAGGGAAGCTGAGGGACTGGTGGAGAGCAGACCTCTTCTTGAGATCACGGAGGTGGTAGTGGAGCAGAAGAGTGAGCTGGAGGAGGACAAAGAGAAGATTTGTTCAGCAGACTTGATGGATCCTAATCCAGAATCAGTGATGGAATGGGCCAAAATCCAGACTGCTGCCGATGAAAGCAAATGGAAGTTTAGTTCTGAGGAGGAAAGACAGAGATTTCAGGGGATGGTGACAGAGGATGGAGGTGTCTGTCCATTCATGCCAGCAGGTGGGTTCTCATGTCACTTGGGTTCTTATAAAGCAGCTCCTTCCAGCACACTGACACATGCTGGCTCTGGTAACCATGGCCTTCTGAAAAGCCTACAAGAATCCCAAGCTTGCGCCAACGGAAACGAGTCCTTTGAACCAACAGCAGATGGTGCTGAAGAGAGTGAGATTGATGGTTCTAAAGTACCAGTACAATTGACTTCTGCTCTGTTTACCACTGATGATGTGTATGCCGATGACTTGTTCACCAGAGGAAGTGAAGCCCAGGCCAGTAATGGCAGTCTTGTGTATGACCTGAGTGCGCTGCTGGCGGACAACCATGCACCGTCCTTTAATCACACATGGCTCCAGCCTACGCCCACTGGTTGGCATTTTCCAGTGGGACCTGGACTGTCAGAGGTAGTATATCATCCGTTACAGTTCCCCGGCACAAGCTACTACCAAGGATTTCAAGAAAATACAAATTTTGAAGTGGTGTGGAGGGTGTGGGAGGACCTTGGTAAAACCTCCAGTCCCTGCGTATCTCCCCACACAGCCTGTGTAGATCCTGGGTCTAAGTTTGACTTCACCATTATGTCCTACAACATCCTGGCCCAGGATCTGCTAGAGGCTAACTCAGAGCTGTATGCACACTGCTCAGAGAATGTGCTAGCATGGGAAAACCGTTTAGAGAATATTCTCAAAGAGCTACAGACCTGGGAACCTGATATTATTTGTCTTCAAGAGGTGCAAGAGAATCACTTCCAAGAGCAGATGTATCCAGCCTTGATTGAGATGGGATATGACTGTGTGTACAAACGTCGCACAGGCAACAAAACAGATGGCTGTGCAGTGTGTTACAACACTAAGTGCTTTACACAACTCTCTGTGCGCCTGCTCGAGTTCCAGCGTCACGAGTGTGAACTGTTGGACCGGGACAATGTGGGCATCGTGCTGCTCCTCCAGCCAACCACAGCGCATGGGGACGACATTACGTTCCGGCCCATCTGTGTGGccaacacacacctgctgttcAACCCCAGGAGGGGAGATGTGAAACTGGCCCAGCTGGCCATAATGCTGGCAGAGATTGACAGCATGGTCAGGCAGTGTAAGGTCAAAGGGCGTGAGTGCGAGATCATTCTGTGTGGGGACTTcaactccttacccaacatgcCACTCTATCAGCTGATCGTCACGGGCCAGCTCTACTACCATGGACTACCAAACTGGATGGTGTCTGGTCAGGAGGACTTGTCCTACAAAACCCATCACAGGCGGCTCTACGCTCCTTTGTGGCCCAGCAGCTTGGGTATCAGTGATAACTGTCGGTACTATGACATTTTTGAGCCTGAAGGCAAAGAATCAGGGAAACTGCAGTACAATCATGACTTCCTGCGGCAGCTGCGTTACTGCCCGGCAGCCTGTGTGCGGCCCCCTGACCTGGAGCTCATACCAGGTGTCACCGACAACACTCCGACTCCTGAAGAAACACAGCCAATTCCTCCAAGGCATTTCAGAAACACCATATGTCATGGCTTTAACCTAAGCTCTGTGTACAGCCAAAACATATCAGGCACTGAGTGCTGTGCAGTCACCACGCTGCACTCACATGGAGCTGCCATGGTCGACTACATCTTCTACTCCGCACGGAGAGAACACACTACGGGTTGTGATGACAAAGAGAAGGGTCTGAAGTTGCTTGGCCGTCTTGCTCTGCTGTCTGAAGCTGACCTTTGGTTGCTGAATGGACTCCCAAATGAAATATTCCCATCTGACCACCTCAGTCTGCTGGCCAAGTTTCAGCTCTGCTGAGTGATCAGGGTTCTAGCAAGTGTGACGCAGCCAAGCGGTGCATACATGACCCCAAGTTCAAGTTCCCAGTGTCGCTAGGGCCCCAATGCAGTGCACTTTGTTATAAGCCCAAGCACTGTTGTAACTTCTTTGAGGCCTTAATCAAGAGATGTGTTTTCTCATTGTTCCAACTACTGAAAGTCAAAGACAGGGTAAAACAGTTTTCTTCCCGTCAGAGATTATGGCCCAGTTCTGAACATCATCTATCATTTTAAATGGTTTCCTCCTTTTGACTGATGCAATTTCTAAAGGTAATTTTAGGCAAATggcattttttatatttgctgtCCAAAACTGATAAGGCTGTCTTAAGGTTGTTTTAAAATTTGAGTTAAGCTAATACATGGGGCATTGACAAATTGAGCTGTGCAGTCTTGTtgccaaaacatttttaacatggaAAATACTGAACGTAcctcattttgtttttgaatttatATTGGAGACTACCTGCTTTTGTTTTGAGCGGCTTCATATTCTTTCAgtggaagaaaaaataaaatatcttgcCAATAAATAGTA

Function

symbol description
angel1 Predicted to enable 3'-5'-exoribonuclease activity. Is expressed in female organism. Orthologous to human ANGEL1 (angel homolog 1).

NR:

description
protein angel homolog 1-like isoform X1

GO: NA

KEGG:

id description
K18729 ANGEL; protein angel

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026934457.2 True 2982 mRNA 0.48 10 9825172 9835028

Neighbor

gene id symbol gene type direction distance location
arel1 arel1,LOC107573237,LOC107672354 coding downstream 19520 9789744 ~ 9805652 (-)
LOC113538936 ltbp2 coding downstream 74798 9634066 ~ 9750374 (-)
trnas-aga_11 NA coding downstream 196698 9628393 ~ 9628474 (-)
hs1bp3 hs1bp3 coding downstream 196758 9619936 ~ 9628414 (-)
LOC113538930 NA coding downstream 276627 9536883 ~ 9548545 (-)
dlst dlst,LOC107092408,LOC103357959,LOC102784039,LOC108236193,LOC105916992 coding upstream 32049 9867077 ~ 9877765 (-)
esrrb esrrb,LOC107678144 coding upstream 104636 9939664 ~ 9993316 (-)
LOC113538905 gpatch2l coding upstream 190995 10026023 ~ 10056072 (-)
LOC113538921 ift43,LOC107688076,LOC106590872 coding upstream 250104 10085132 ~ 10105171 (-)
ttll5 ttll5 coding upstream 291305 10126333 ~ 10207794 (-)
G162545 NA non-coding downstream 423 9824614 ~ 9824749 (-)
G162514 NA non-coding downstream 203487 9621382 ~ 9621685 (-)
LOC117598277 NA non-coding downstream 236870 9586707 ~ 9588302 (-)
G162497 NA non-coding downstream 275592 9549342 ~ 9549580 (-)
G162279 NA non-coding downstream 428200 9396255 ~ 9396972 (-)
G162548 LOC108269647 non-coding upstream 8748 9843776 ~ 9850329 (-)
G162812 NA non-coding upstream 418976 10254004 ~ 10254213 (-)
G162818 NA non-coding upstream 427415 10262443 ~ 10264117 (-)
LOC117598311 NA non-coding upstream 456621 10291649 ~ 10293566 (-)
G163083 NA non-coding upstream 771029 10606057 ~ 10606812 (-)
LOC113538771 hpcal1,LOC106607246,LOC105015955,LOC107565203 other downstream 308721 9491217 ~ 9516451 (-)
LOC113545095 NA other downstream 759894 9060483 ~ 9065278 (-)
zgc:103755 clip4,LOC107676111,LOC107685343 other downstream 2556040 7203781 ~ 7269132 (-)
G160645 LOC108270426 other downstream 3016603 6807484 ~ 6808569 (-)
asap3 LOC108270084,LOC108438745,LOC107721750 other downstream 3472518 6301534 ~ 6352654 (-)
acyp1 acyp1 other upstream 424421 10259449 ~ 10261465 (-)
LOC113538721 prima1,LOC108270468,LOC108423434 other upstream 569046 10404074 ~ 10417586 (-)
fam98b fam98b other upstream 636958 10471986 ~ 10479042 (-)
bmp4 bmp4,LOC107701526,LOC107723271 other upstream 1364109 11199137 ~ 11216157 (-)
LOC113538914 csgr16h14orf132,LOC108269530,LOC108423442,LOC108413331,LOC104942337 other upstream 1561154 11396182 ~ 11406751 (-)

Expression


Co-expression Network