XLOC_005725 (AL935294.2)



Basic Information


Item Value
gene id XLOC_005725
gene name AL935294.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 3259543 ~ 3260961 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00011344
CTTTAGCTGCATCCCGATTCAAAAGGTTTGAAGAACAAGTCTAAGTTCTCAAGACGAATGGGATGGTCTACTGGTCGAAATACGTTTACCTTAgtccatttcaagagttcacacttagatattgatTGATGCTATTAGCAGGATTGGCATGCtttcccaggagagaaccctgagctaggacatatttgagcccagggctctgGTCTGGTCAATAAGCAAATAAGggggtctgagatcaggtaggtctcgatcgctccccctgataaaaggaagaaaaggaagaagatggggtggaaggggggattcttcaaaaacaaagaaaaggtaGTAGGGTGAAATCAGTCTACTTAATGtaggcttggatcaatctgattggattatagctgattacagatgagagaccagctgcgacCAATTATATCtttaaattagtttgtaaaacttcacttatgtGCACAATAAACACTATGAAACACATATAAAATCATACATAAAACAGCTTCTTGTTTCGAACTGTCTACAAGTGTTGgtatttttaaaattcatataGTAGGTTAAAAACGGATATGCAATACTCttgaattttctttaaaaacatccCATCGTACAATGAGTTTTGCGATGgttgaggaccactggtcTAGGCTGCAAATAATCCATTTACTGTATCCTTCACTGTCACTGAAACAAAGAATGAATCTCAAGTTTAGGATTGGGACG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104739

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00011344 True 720 lncRNA 0.39 2 3259543 3260961

Neighbor


gene id symbol gene type direction distance location
XLOC_005724 prph2b coding upstream 771 3252950 ~ 3258772 (+)
XLOC_005723 NA coding upstream 314553 2943281 ~ 2944990 (+)
XLOC_005722 NA coding upstream 331088 2923920 ~ 2928455 (+)
XLOC_005721 wu:fj16a03 coding upstream 345644 2908764 ~ 2913899 (+)
XLOC_005720 CABZ01087629.1 coding upstream 357836 2894536 ~ 2901707 (+)
XLOC_005726 NA coding downstream 358305 3619266 ~ 3620828 (+)
XLOC_005727 qkib coding downstream 406269 3667230 ~ 3843692 (+)
XLOC_005728 timm23b coding downstream 619921 3880882 ~ 3926179 (+)
XLOC_005729 CU019624.1 coding downstream 634402 3895363 ~ 3907897 (+)
XLOC_005730 yipf3 coding downstream 677565 3938526 ~ 3950673 (+)
XLOC_005718 BX571701.4 non-coding upstream 426336 2833092 ~ 2833207 (+)
XLOC_005715 NA non-coding upstream 583207 2671432 ~ 2676336 (+)
XLOC_005710 CR376766.1 non-coding upstream 873010 2386413 ~ 2386533 (+)
XLOC_005732 NA non-coding downstream 718966 3979927 ~ 3985680 (+)
XLOC_005733 NA non-coding downstream 872782 4133743 ~ 4134113 (+)
XLOC_005734 NA non-coding downstream 920270 4181231 ~ 4192036 (+)

Expression



Co-expression Network