XLOC_005726


Basic Information

Item Value
gene id XLOC_005726
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 3619266 ~ 3620828 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013543
GTTTTTGGTGCTCACTTTGTGAGATGGCATCCGACATACAGACATTGCTGTGCTGTGAACGTTTATTGGATTGATGTCTGTTACATATGCTTTTTGATTCAGATTAACAGCCATCTGTTTCCCATTATGGTTTGTGACAAGGGCGCTGGGACCTTGCGAGATCACAACTGAAATCCCGGTGTAAACCCCAGGTCGACAATGAAGTGCGATATTCacagctgat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013543 True 223 lncRNA 0.44 3 3619266 3620828

Neighbor

gene id symbol gene type direction distance location
XLOC_005725 AL935294.2 coding upstream 358305 3259543 ~ 3260961 (+)
XLOC_005724 prph2b coding upstream 360494 3252950 ~ 3258772 (+)
XLOC_005723 NA coding upstream 674276 2943281 ~ 2944990 (+)
XLOC_005722 NA coding upstream 690811 2923920 ~ 2928455 (+)
XLOC_005721 wu:fj16a03 coding upstream 705367 2908764 ~ 2913899 (+)
XLOC_005727 qkib coding downstream 46402 3667230 ~ 3843692 (+)
XLOC_005728 timm23b coding downstream 260054 3880882 ~ 3926179 (+)
XLOC_005729 CU019624.1 coding downstream 274535 3895363 ~ 3907897 (+)
XLOC_005730 yipf3 coding downstream 317698 3938526 ~ 3950673 (+)
XLOC_005731 lrrc73 coding downstream 333712 3954540 ~ 3966255 (+)
XLOC_005718 BX571701.4 non-coding upstream 786059 2833092 ~ 2833207 (+)
XLOC_005715 NA non-coding upstream 942930 2671432 ~ 2676336 (+)
XLOC_005732 NA non-coding downstream 359099 3979927 ~ 3985680 (+)
XLOC_005733 NA non-coding downstream 512915 4133743 ~ 4134113 (+)
XLOC_005734 NA non-coding downstream 560403 4181231 ~ 4192036 (+)
XLOC_005737 NA non-coding downstream 711917 4332745 ~ 4335902 (+)

Expression


Co-expression Network