XLOC_005733


Basic Information

Item Value
gene id XLOC_005733
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 4133743 ~ 4134113 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013545
AAAATACATTTCATAGTACATGCTGCAAAATAGACCAGAATTAGGAAGGCTAACACTCTTGCTAACGGCGGCTAAAATATCCTCGCTCGCGCCGTCAGGAGCGATCTCCGATCCCGCGTCCTCTCGCCGCTATCTCTGGGCGAGGAGTTAAAGTGTTACCGCAGATGGCAGGTGTGGATATCCGCTGTTCCAGATTTCAGATAAAAGTTATCTCCATCCTCTCCCGTTCAGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013545 True 232 lncRNA 0.50 2 4133743 4134113

Neighbor

gene id symbol gene type direction distance location
XLOC_005732 NA coding upstream 148063 3979927 ~ 3985680 (+)
XLOC_005731 lrrc73 coding upstream 167488 3954540 ~ 3966255 (+)
XLOC_005730 yipf3 coding upstream 183070 3938526 ~ 3950673 (+)
XLOC_005728 timm23b coding upstream 207564 3880882 ~ 3926179 (+)
XLOC_005729 CU019624.1 coding upstream 225846 3895363 ~ 3907897 (+)
XLOC_005734 NA coding downstream 47118 4181231 ~ 4192036 (+)
XLOC_005735 dlk2 coding downstream 71611 4205724 ~ 4213909 (+)
XLOC_005736 mea1 coding downstream 91060 4225173 ~ 4232690 (+)
XLOC_005737 NA coding downstream 198632 4332745 ~ 4335902 (+)
XLOC_005738 sft2d1 coding downstream 234391 4368504 ~ 4400816 (+)
XLOC_005726 NA non-coding upstream 512915 3619266 ~ 3620828 (+)
XLOC_005725 AL935294.2 non-coding upstream 872782 3259543 ~ 3260961 (+)
XLOC_005723 NA non-coding upstream 1188753 2943281 ~ 2944990 (+)
XLOC_005739 NA non-coding downstream 264038 4398151 ~ 4408956 (+)
XLOC_005744 NA non-coding downstream 419279 4553392 ~ 4553670 (+)
XLOC_005745 NA non-coding downstream 507192 4641305 ~ 4666921 (+)

Expression


Co-expression Network