XLOC_005739


Basic Information

Item Value
gene id XLOC_005739
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 4398151 ~ 4408956 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013377
ctgtttaaatatttaaaaggaagTGAATGGGAATTAGAGTCATCACCAGCTATCAAATATGCAAAAAGATCCTAAATTGTTTGCttggcaaaacaaaataaagtatgCAAGAGCTTCACCCGGCGACAATGAAGAAAAATCCCCAATTACAAAGACTTAAATTTGACAGACAGCTGAACTTAACTGCTATAtttgaaaaagggaaaatataATTGGAAGACTAATCATTTTGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013377 True 233 lncRNA 0.33 2 4398151 4408956

Neighbor

gene id symbol gene type direction distance location
XLOC_005737 NA coding upstream 62249 4332745 ~ 4335902 (+)
XLOC_005736 mea1 coding upstream 165461 4225173 ~ 4232690 (+)
XLOC_005735 dlk2 coding upstream 184242 4205724 ~ 4213909 (+)
XLOC_005734 NA coding upstream 206115 4181231 ~ 4192036 (+)
XLOC_005733 NA coding upstream 264038 4133743 ~ 4134113 (+)
XLOC_005741 si:ch211-130h14.4 coding downstream 338 4409294 ~ 4439040 (+)
XLOC_005742 tbxtb coding downstream 30118 4439074 ~ 4453663 (+)
XLOC_005743 pde10a coding downstream 96123 4505079 ~ 4620715 (+)
XLOC_005744 NA coding downstream 144436 4553392 ~ 4553670 (+)
XLOC_005745 NA coding downstream 232349 4641305 ~ 4666921 (+)
XLOC_005732 NA non-coding upstream 412471 3979927 ~ 3985680 (+)
XLOC_005729 CU019624.1 non-coding upstream 490254 3895363 ~ 3907897 (+)
XLOC_005747 NA non-coding downstream 302313 4711269 ~ 4721332 (+)
XLOC_005751 NA non-coding downstream 714474 5123430 ~ 5129369 (+)
XLOC_005752 CR788226.1 non-coding downstream 988585 5397541 ~ 5401220 (+)

Expression


Co-expression Network