XLOC_005744


Basic Information

Item Value
gene id XLOC_005744
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 4553392 ~ 4553670 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013379
GCATTTATTGTGAATTGAAGGTGTGTATTCTGAAGTTGAGAATCTCCACGTTATAAATCAAGCTGATCGCACAACGTGACACTGTTCAAATCAATAGGCTAAAGGACAAAACCGGCCGGCGTCATCTAGATCTTTCTAATTCTGTCTCCTTCAAGGATTGTGAAGGATAGATCTGGTGACAGAATGGCTTGATTTTCACTTCGGAGGTCAACATCTGTCcagtaatttaatttgtaaatgtaGGATGCAAATGGCTTATTGTTGTTGAAGGTACTACTT

Function

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013379 True 279 lncRNA 0.39 1 4553392 4553670

Neighbor

gene id symbol gene type direction distance location
XLOC_005742 tbxtb coding upstream 99729 4439074 ~ 4453663 (+)
XLOC_005741 si:ch211-130h14.4 coding upstream 114352 4409294 ~ 4439040 (+)
XLOC_005739 NA coding upstream 144436 4398151 ~ 4408956 (+)
XLOC_005740 prr18 coding upstream 146318 4405282 ~ 4407074 (+)
XLOC_005738 sft2d1 coding upstream 152576 4368504 ~ 4400816 (+)
XLOC_005745 NA coding downstream 87635 4641305 ~ 4666921 (+)
XLOC_005746 pla2g12b coding downstream 118028 4671698 ~ 4683595 (+)
XLOC_005747 NA coding downstream 157599 4711269 ~ 4721332 (+)
XLOC_005748 micu1 coding downstream 318216 4871886 ~ 4969687 (+)
XLOC_005749 mrps6 coding downstream 441763 4995433 ~ 5000739 (+)
XLOC_005737 NA non-coding upstream 217490 4332745 ~ 4335902 (+)
XLOC_005734 NA non-coding upstream 361356 4181231 ~ 4192036 (+)
XLOC_005733 NA non-coding upstream 419279 4133743 ~ 4134113 (+)
XLOC_005732 NA non-coding upstream 567712 3979927 ~ 3985680 (+)
XLOC_005751 NA non-coding downstream 569760 5123430 ~ 5129369 (+)
XLOC_005752 CR788226.1 non-coding downstream 843871 5397541 ~ 5401220 (+)
XLOC_005753 NA non-coding downstream 852480 5406150 ~ 5411457 (+)

Expression


Co-expression Network