Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00013379 |
| length | 279 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 1 |
| gene id | XLOC_005744 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007124.7 |
| NCBI id | CM002897.2 |
| chromosome length | 52186027 |
| location | 4553392 ~ 4553670 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005615 | extracellular space | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00013378 | lncRNA | upstream | 122688 | 4425021 ~ 4430704 (+) | True | XLOC_005741 |
| TCONS_00013377 | lncRNA | upstream | 144436 | 4398151 ~ 4408956 (+) | True | XLOC_005739 |
| TCONS_00011364 | lncRNA | upstream | 217490 | 4332745 ~ 4335902 (+) | True | XLOC_005737 |
| TCONS_00013546 | lncRNA | upstream | 361356 | 4181231 ~ 4192036 (+) | True | XLOC_005734 |
| TCONS_00013545 | lncRNA | upstream | 419279 | 4133743 ~ 4134113 (+) | True | XLOC_005733 |
| TCONS_00013547 | lncRNA | downstream | 87635 | 4641305 ~ 4666921 (+) | False | XLOC_005745 |
| TCONS_00013380 | lncRNA | downstream | 111188 | 4664858 ~ 4666921 (+) | True | XLOC_005745 |
| TCONS_00013548 | lncRNA | downstream | 157599 | 4711269 ~ 4721332 (+) | True | XLOC_005747 |
| TCONS_00013549 | lncRNA | downstream | 569760 | 5123430 ~ 5129369 (+) | True | XLOC_005751 |
| TCONS_00011385 | lncRNA | downstream | 843871 | 5397541 ~ 5401220 (+) | False | XLOC_005752 |
| TCONS_00011370 | mRNA | upstream | 99729 | 4440869 ~ 4453663 (+) | True | XLOC_005742 |
| TCONS_00011369 | mRNA | upstream | 99876 | 4439074 ~ 4453516 (+) | False | XLOC_005742 |
| TCONS_00011367 | mRNA | upstream | 114352 | 4409294 ~ 4439040 (+) | False | XLOC_005741 |
| TCONS_00011368 | mRNA | upstream | 115726 | 4422795 ~ 4437666 (+) | False | XLOC_005741 |
| TCONS_00011366 | mRNA | upstream | 146318 | 4405282 ~ 4407074 (+) | True | XLOC_005740 |
| TCONS_00011373 | mRNA | downstream | 118028 | 4671698 ~ 4683595 (+) | False | XLOC_005746 |
| TCONS_00011374 | mRNA | downstream | 118067 | 4671737 ~ 4683149 (+) | False | XLOC_005746 |
| TCONS_00011375 | mRNA | downstream | 118072 | 4671742 ~ 4682358 (+) | True | XLOC_005746 |
| TCONS_00011376 | mRNA | downstream | 318216 | 4871886 ~ 4969687 (+) | False | XLOC_005748 |
| TCONS_00011377 | mRNA | downstream | 329707 | 4883377 ~ 4968574 (+) | False | XLOC_005748 |
| TCONS_00011360 | other | upstream | 587137 | 3962767 ~ 3966255 (+) | True | XLOC_005731 |
| TCONS_00011338 | other | upstream | 1720185 | 2833092 ~ 2833207 (+) | True | XLOC_005718 |
| TCONS_00011320 | other | upstream | 2166859 | 2386413 ~ 2386533 (+) | True | XLOC_005710 |
| TCONS_00011310 | other | upstream | 2787770 | 1765507 ~ 1765622 (+) | True | XLOC_005701 |
| TCONS_00011289 | other | upstream | 3703966 | 844143 ~ 849426 (+) | False | XLOC_005684 |
| TCONS_00011389 | other | downstream | 1432106 | 5985776 ~ 6001981 (+) | True | XLOC_005757 |
| TCONS_00011399 | other | downstream | 1860614 | 6414284 ~ 6414400 (+) | True | XLOC_005764 |
| TCONS_00011412 | other | downstream | 2827848 | 7381518 ~ 7381633 (+) | True | XLOC_005774 |
| TCONS_00011427 | other | downstream | 3752997 | 8306667 ~ 8317874 (+) | True | XLOC_005783 |
| TCONS_00011428 | other | downstream | 3985597 | 8539267 ~ 8539381 (+) | True | XLOC_005784 |
