XLOC_005701 (CABZ01044297.1)


Basic Information

Item Value
gene id XLOC_005701
gene name CABZ01044297.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 1765507 ~ 1765622 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011310
TATTaaagccatatcaccctgcagcccaagaccggatactcactgaagctaagcagggttgaacctggtcagtacctggatgagagaccacatgggaaaatcAAGGTTGCtagtcc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000106223

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011310 True 116 rRNA 0.49 1 1765507 1765622

Neighbor

gene id symbol gene type direction distance location
XLOC_005699 DST coding upstream 45577 1575276 ~ 1719930 (+)
XLOC_005698 CABZ01044281.1 coding upstream 212580 1542493 ~ 1552927 (+)
XLOC_005697 CABZ01044277.1 coding upstream 221580 1535511 ~ 1543927 (+)
XLOC_005696 si:ch211-165e15.1 coding upstream 230628 1430094 ~ 1534879 (+)
XLOC_005695 rab23 coding upstream 370505 1381953 ~ 1395002 (+)
XLOC_005702 col21a1 coding downstream 33381 1799003 ~ 1866711 (+)
XLOC_005703 bmp5 coding downstream 107145 1872767 ~ 1906732 (+)
XLOC_005704 hmgcll1 coding downstream 162739 1928361 ~ 1981727 (+)
XLOC_005705 NA coding downstream 217689 1983311 ~ 2033043 (+)
XLOC_005706 NA coding downstream 384148 2149770 ~ 2153016 (+)
XLOC_005687 NA non-coding upstream 779244 973009 ~ 986263 (+)
XLOC_005685 NA non-coding upstream 903611 859057 ~ 861896 (+)
XLOC_005671 NA non-coding upstream 1061169 471548 ~ 704338 (+)
XLOC_005675 NA non-coding upstream 1204522 553591 ~ 560985 (+)
XLOC_005670 CABZ01061569.1 non-coding upstream 1327045 438347 ~ 438462 (+)
XLOC_005708 CR376766.2 non-coding downstream 586667 2352289 ~ 2352995 (+)
XLOC_005710 CR376766.1 non-coding downstream 620791 2386413 ~ 2386533 (+)
XLOC_005715 NA non-coding downstream 905810 2671432 ~ 2676336 (+)

Expression


Co-expression Network