XLOC_005697 (CABZ01044277.1)


Basic Information

Item Value
gene id XLOC_005697
gene name CABZ01044277.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 1535511 ~ 1543927 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011306
CATTACAGCCAATTAGAGAACGTTTAATAAAGTAAACCCTGACTGAGCTGTGTTTCATTACAGATGCAGATGACGCAGCCGCTGAAGCAGAGCTACTCAGAGAAGATCAACAAGTTGGAGACTCTGTACAGCCGGCTGCTGAAAAGCTCCAGCGAGCGGCAGAGAAACCTGGACAGCCTGCATGACTTTGTGTCCCGAGCCACTCAAGAGCTGATCTGGCTGAACGAGAAAGAGGAAGAGGAGGTGGCCTTCGACTGGAGCGAGAGAAACACCAGCGTTTCCAGGAAGAGGGATTATCATTCTGATCTGATGAGGGAACTGGACGACAGGGAGGAGGTGATCAGGTCTGTGCAGGAGAAAGCGGAGAACCTCCTGCTGGAGAACCACCCGGCCAGGCTGACCATTGAGGCGTACAGAGCGGCCATGCAGACGCAGTGGAGCTGGATCCTGCAGCTCTGCCACTGTGTGGAGCAGCACCTGAAAGACAACACTGTCTACTTCGATTTTTTCAGCGATGCCAAAGAGTCCCTGGACTACCTGAAGAGCCTCCAAGATGCCATTCACAGGAAGTACAGCTGTGACAGAAGCAGCAGTCTACACCGGCTGGAGGATCTCATTCAGGAGTCGATGGATGAGAAGGAGCAGCTCCTGAAGTACAGCAGTACTGTGGGTGGGTTAGTGGGCCGAGCAAAAGCCATCGTTCAGCTCAAGGCTAGAAACCCAGAGAATCCCATCAGGACGTCCATACCTGTCAAAGCCATCTGTGACTACCGGCAGATAGAGATCACCATCGGCAAAGAGGACGAGTGTGTTCTGGTGAGCAACTCGCACAGAGCCAAGTGGAAAGTCATCAGTACGTCTGGAAATGAGGCCATGGTGCCTTCAGTCTGCTTCAGTGTTCCTCCACCCAATAAAGAAGCCACTGAAATGGCAAGCAGGATTGAGCAGCTGTACCAGAATGTTCTGGCTTTATGGCATCACTCCCACATCAACATGAAGAGCGTTGTGTCCTGGCACTATCTGATGACTGACATCCGCGCCATCCGCAAAAGCACCGTGGCCTCGATCAAGACGCTGCTGCCCGGAGATCATGAGCAAGTTTTAAGCGATCTTCAGGCTCACTTCCAGGACTTCCTGAGGGACAGCGATGAATCTGAGGTGTTCACAATGGCAGACTGTGCTCAGCTGGAAAAGGAGGTTCTGGCCTGTAAGGAGTATTATGAGGAGCTTCTCAAATCTGCAGAGAGAGAAGAGCACGAGGAGTCCGTCTACAACCTCTTCATATCTGAGGTGCGCAACTTCCGCATGCGTGTGGAGGGACACGAGGAGCAGCTGATCCGCAAAATCCGAACCCCGCTGGACCGAGACGACCTGCAGGAGTGTCTGCTGCGCATCACTGAGCAGGAGAAGAAGAAGGTGGAGCTGGACAGGCTGAAGGATGAGCTGGAGACTCTGAGAGAGAAGTGTGAAGTTTTCCTCCGTCAGGCGTCCGCTTCTCCATCCGTCCCCACACTGTCCTCCGAGCTCAGCGTCCTCACCCAGAGCTCCAGCCAGGTCTACTCCATGTGCTGCATCTACCTGGAGAAGCTGAAGACGGTGAGTTTGGTGGTGAAACACAGTCAAAGCGCTGAAGCTCTGGTCAAACTATATGAGGCCAAGCTGAGCGAGGAGGATTCAGTAAATGCCAACATCAAGTCTATCGATGGAGTCGTGAGCACTCTTAAGCAATGGAGGTCTGAAATTGACGAGAAGCGAGAGGTTTTCCATGACCTGGAGGACGAGCTGCAGAAGGCGCGGGTGGTCAGCGAACGCATGTTTAAAACGCACAACGAGAGAGACTTTGATTTGGACTGGCACAAGGAGAAGGCAGACCAGCTGAAAGAAAGATGGCAGAACATCCACTCTCAGATTGAAAACAGGTCATTATGTTGATCCTTTAGCTCCGTCTAGTGCTGTGCTGCAGGATTCAGCCTGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098631

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011306 True 1975 mRNA 0.53 13 1535511 1543927

Neighbor

gene id symbol gene type direction distance location
XLOC_005696 si:ch211-165e15.1 coding upstream 632 1430094 ~ 1534879 (+)
XLOC_005695 rab23 coding upstream 140509 1381953 ~ 1395002 (+)
XLOC_005694 ifngr1l coding upstream 160584 1357552 ~ 1374927 (+)
XLOC_005693 tnfaip3 coding upstream 326581 1182257 ~ 1208930 (+)
XLOC_005692 perp coding upstream 364816 1155536 ~ 1170695 (+)
XLOC_005699 DST coding downstream 31349 1575276 ~ 1719930 (+)
XLOC_005700 zmp:0000000760 coding downstream 183026 1726953 ~ 1786145 (+)
XLOC_005701 CABZ01044297.1 coding downstream 221580 1765507 ~ 1765622 (+)
XLOC_005702 col21a1 coding downstream 255076 1799003 ~ 1866711 (+)
XLOC_005703 bmp5 coding downstream 328840 1872767 ~ 1906732 (+)
XLOC_005687 NA non-coding upstream 549248 973009 ~ 986263 (+)
XLOC_005685 NA non-coding upstream 673615 859057 ~ 861896 (+)
XLOC_005671 NA non-coding upstream 831173 471548 ~ 704338 (+)
XLOC_005675 NA non-coding upstream 974526 553591 ~ 560985 (+)
XLOC_005670 CABZ01061569.1 non-coding upstream 1097049 438347 ~ 438462 (+)
XLOC_005705 NA non-coding downstream 439384 1983311 ~ 2033043 (+)
XLOC_005706 NA non-coding downstream 605843 2149770 ~ 2153016 (+)
XLOC_005708 CR376766.2 non-coding downstream 808362 2352289 ~ 2352995 (+)
XLOC_005710 CR376766.1 non-coding downstream 842486 2386413 ~ 2386533 (+)

Expression


Co-expression Network