AMCG00001472


Basic Information

Item Value
gene id AMCG00001472
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 5228893 ~ 5234059 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001472
GACACCGCGCTGCGCAACATGAGATGCCAGTTGTGCTGGGACTGAGCCCCGCTTCTGGGCTGGGCTGGTGGAGCCGAACTGGGGTGCTGGTTTGGGGCGCATTTCTTCTCTTAGCAATGTCAAGCGACGTGGTCAATGCCGGGGCCAGGCTGGCCTCAGTAGACTTTGAAATATTCGGCAACGTTCAGGGCGTCTGCTTCAGAATGTACACAGAGGAGGAGGGCCGCAAGCTGGGCGTAACCGGCTGGGTGAAGAACACCAGGCAGGGGACAGTGGTGGGCCAGGTGCAGGGGCCCCCGGACAAAGTCAACGAAATCATCTTCTATCCCAAAGCTTTCGAGAACATACACTGCCCTGCCATATGTCAAGCCTTTACACAAGACATAGGATCTGCATGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003998 acylphosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001472 True 398 mRNA 0.57 4 5228893 5234059

Neighbor

gene id symbol gene type direction distance location
AMCG00001471 NA coding downstream 31161 5189982 ~ 5197732 (-)
AMCG00001474 NA coding downstream 75780 5152766 ~ 5153113 (-)
AMCG00001473 sptbn1,LOC108442064 coding downstream 108019 5082622 ~ 5120874 (-)
AMCG00001469 NA coding downstream 160731 5040211 ~ 5068162 (-)
AMCG00001468 LOC106608004 coding downstream 213395 5010944 ~ 5015498 (-)
AMCG00001482 slc30a6 coding upstream 80636 5314695 ~ 5318910 (-)
AMCG00001481 NA coding upstream 143371 5377430 ~ 5380202 (-)
AMCG00001485 NA coding upstream 183436 5417495 ~ 5418131 (-)
AMCG00001484 NA coding upstream 185406 5419465 ~ 5425661 (-)
AMCG00001490 LOC104944990 coding upstream 520976 5755035 ~ 5800959 (-)
G158017 rtn4 non-coding downstream 294020 4914789 ~ 4934873 (-)
G157970 NA non-coding downstream 576887 4651338 ~ 4652006 (-)
G157911 NA non-coding downstream 959033 4263926 ~ 4269860 (-)
G157850 NA non-coding downstream 1075445 4095235 ~ 4153448 (-)
G157798 NA non-coding downstream 1312758 3914113 ~ 3916135 (-)
G158222 NA non-coding upstream 593437 5827496 ~ 5827789 (-)
G158238 NA non-coding upstream 670491 5904550 ~ 5909009 (-)
G158245 NA non-coding upstream 683741 5917800 ~ 5919711 (-)
G158247 NA non-coding upstream 686657 5920716 ~ 5921922 (-)
G158260 NA non-coding upstream 764068 5998127 ~ 6001058 (-)
AMCG00001426 NA other downstream 1332814 3874038 ~ 3896079 (-)
AMCG00001416 LOC107564242 other downstream 1707185 3518875 ~ 3521708 (-)
G157671 NA other downstream 1736183 3489767 ~ 3492710 (-)
G157593 NA other downstream 1968938 3222677 ~ 3259955 (-)
AMCG00001396 srsf7 other downstream 3209029 2002361 ~ 2019864 (-)
G158123 NA other upstream 143371 5377430 ~ 5418243 (-)
AMCG00001483 NA other upstream 207568 5441627 ~ 5443581 (-)
G158207 NA other upstream 361325 5595384 ~ 5597839 (-)
AMCG00001487 NA other upstream 423903 5657962 ~ 5746325 (-)
AMCG00001491 NA other upstream 646125 5880184 ~ 5882320 (-)

Expression


Co-expression Network