AMCG00002407


Basic Information

Item Value
gene id AMCG00002407
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13375580 ~ 13376288 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002407
ATGAAGCTGTACCTGCTCTGGACTCTGCCGCTCCTGGCCAGTGCAGACTCCTGTGGAGCCTTGCCTGCAGAGCGTAACGCAGCGCTGTACGGCCGGCCCACGCAGTCCTCGGTGCTGGAGCTGGGCCAGGCCATCAATGCGGTGGACGGGAACGCCGAGGCAGACCCCCTCAAGGGCTCCTGCAGCAGCACGCGCCTCCAGCATGCCCCCTGGTGGAGGGTGGACCTGCTGGCCGAGCACAACGTTTCCACTGTCCGCGTCACCGGCCGCGGCTGCCCCAACAGCAGGGCCTGGCTGGCCAGGGCACAGGTCCGTGTGGGGAGTCGGAGAGCGCACGACCGTAACCCTCTGTGTGGTGAGCTGGTAGTGGACCAGGTGACCCAGGAGCTGTGCTGCCAGGGCATGCAGGGGCGCTTCGTGTCAATATCACTGTACAATGTCAACTCCATCCTCAGCCTGTGTGAGGTGGAGGTGCTGGCTGTGCCTGCGGGGCAAGAGAGCTGCCTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002407 True 510 mRNA 0.66 3 13375580 13376288

Neighbor

gene id symbol gene type direction distance location
AMCG00002406 NA coding upstream 1842 13369311 ~ 13373738 (+)
AMCG00002409 NA coding upstream 47181 13307997 ~ 13328399 (+)
AMCG00002408 NA coding upstream 71024 13271681 ~ 13304556 (+)
AMCG00002402 NA coding upstream 138175 13228527 ~ 13237405 (+)
AMCG00002401 NA coding upstream 181504 13191029 ~ 13194076 (+)
AMCG00002412 NA coding downstream 12897 13389185 ~ 13406063 (+)
AMCG00002414 NA coding downstream 54548 13430836 ~ 13439194 (+)
AMCG00002413 NA coding downstream 64649 13440937 ~ 13455498 (+)
AMCG00002418 erp44,LOC107593692,LOC107723539 coding downstream 113890 13490178 ~ 13511283 (+)
AMCG00002422 NA coding downstream 278951 13655239 ~ 13656558 (+)
G122929 NA non-coding upstream 69981 13304697 ~ 13305599 (+)
G122914 NA non-coding upstream 185718 13189282 ~ 13189862 (+)
G122911 NA non-coding upstream 187302 13187949 ~ 13188278 (+)
G122876 NA non-coding upstream 307945 13067265 ~ 13067635 (+)
G122868 NA non-coding upstream 323190 13052025 ~ 13052390 (+)
G123039 NA non-coding downstream 169776 13546064 ~ 13546300 (+)
G123041 NA non-coding downstream 190126 13566414 ~ 13570811 (+)
G123043 NA non-coding downstream 196231 13572519 ~ 13590681 (+)
G123169 NA non-coding downstream 988748 14365036 ~ 14366335 (+)
G123171 NA non-coding downstream 992805 14369093 ~ 14369913 (+)
AMCG00002393 NA other upstream 245883 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 304748 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 323609 13031759 ~ 13051971 (+)
G122746 NA other upstream 1235115 12133786 ~ 12140465 (+)
AMCG00002360 NA other upstream 1359496 12011971 ~ 12016084 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 951344 14327632 ~ 14361536 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 3581873 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 3600000 16976288 ~ 16985906 (+)
G123807 NA other downstream 4539148 17915436 ~ 17984730 (+)
G123989 NA other downstream 5455726 18832014 ~ 18838531 (+)

Expression


Co-expression Network