AMCG00002409


Basic Information

Item Value
gene id AMCG00002409
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13307997 ~ 13328399 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002409
ATGAACAGGGGAGTCCAATACCTGCCCGGCCACTTCTGCACTGTGCAGGGCTTTCCTATAACCAGCTCCTTCACTACATTAACTCAACTCATCAACTTGCCAGACACGCTGTGCTCAGGCCGGCCCTGCGAAGCTGCTGTCGCACGCAGCGGGGCCCGGGGCCCTGTCAACAGCGTGAGCCTGAGGGACCCTTGGCAGCTCAGGgCCTTTGAAGTCGCCCTGTCTTTTGTATCCAGGAGGATGTTTCCATTTGTCATCCTCTGCAGATACCAGACCCCCTGCAAGGCCATCGCAGAGCTTTACGAGACAGTCGTTTTTATGGCTCCCGTTGGTTTCAAATGGGGTTTATTATCGCTCCCGGGCGGCAGCCAATCAGAGGGCGGAGAGGGGAGCCGGTGTGACGCGGGGGTCTGGGGGCAGGAGGAGGTGAGCCGAGCGGGGCGGGGAGACTTAAAACCCCGGGCCGCCGCACTCCGCAGCTGGCCAccggagaggagaggagaggagaggagagagggagagtgggaagGAGGGGAAAGCTGGAGAAGTGGACACGgaaTCCCACTTAGCAATCCAACTCCCCCgaagttttttagtttttatttttttctggtcgtgtttgtttctttaacttCAGTTAAGGCCAGATCAGCCTGTGTCGCCGAGTCTGCGCTGGAAACGCACATATACGCCAAGAGGCGGAGGAGAAGAAGCGCAAGAAACCCTGAAATAAACCTGGATTTGTGTCctgtggcagagagagagagaagctgcCCGGAGCCCCGCCACAGACAGGCCGCCATGGATATGCAGAAGGTTGTGCTGCAGGTCTGGATTGTGATCCTGATGAAGGTTGCCGTAGGAGATGCCTGTGCCAGCGGGCGCCTGACAGATGCTGGCGAGTGCTGTGACCTTTGCCCGGCGGGGTCAGGAGTCACCGTGCCATGCGGCCAGCAGAACACCCATTGCCAACCCTGCCAGGCTGgagtGTCCTTCTCGCTGCTCGGGGATGGCCCCTGCCAGCTGTGCTCCCTGTGCCCGCCCGGCATCGCCGAGGTCGGGCCTTGCTCCCCGACACAGGACCGGCAGTGCGACTGTGGCGACGGCTTCTTCCTGCAGGCGGGGCTCAACAGCTCGGCTGGGATGTGCGCACGCTGCAGCTCGTGCAGGCGGGGGCAGGGTGTGGCACGGGAATGCGGGCTCCTGGGCAACACCGTCTGCAAGCCCTGTGGAGCGGGGTTCTACTCCGAGGAGAGCAGCCGAAAGGAGCCGTGCCGCCCCTGCACCCCCTGCCAGGAGGGCAAGGTGGAGATCCAGCGCTGCCTACCACACTCCAACACCCTGTGCATGGataaGCACCTGCAGATCCTGAATAGGCCAGACCTGGAGGGTGGTCGAGAGTCTCCTCGCCGACAGAATCcccggggtgggggggctgaggAGGACGTGGAGGCGGAGGAGGACGGGGAGAACAGCTCTGTCCCCAGCACCCCCAAGTTCACCCCCCAGGAGGAAGGCGGAAACAACATCATCCCAGTGTACGTCTCCGTGTTGGCCGCCGTGGTGCTGGGACTGCTGCTCTACGTCGCCTACAAGTGCTGGTCGTCTTGCAAGCAGAAGCGGGCCCTGGCGAAGGCGCGGGGCGGGGAGCTCGCCGGCGCCCCCGAGGGGGAGAAGCTGCACAGTGCCAAGCGGGAGAGCAAGCGCGACAGCCGGCTGTACCTGAACGTCGCCCCCCAGAGGCAGGAGGAGGTGGAGCGGCTGCTGCAGGAGGCGGGGGACAAGGCCTGGCGAAACCTGGCAGCCCAGCTGGGCTACGAGCAGGAGCGTGTGGACACCATCGGGCGTGGCGAGGACCCGGCTCACACCATGCTGTCCGACTGGGCGGGACAGGAGGGCTCCACGGTGGCGGCGCTGTGCTCCGCGCTGGGCCGCATCGACCGGGGGGACGTGGCCGCCGCCCTCAGCCGCCCCGCACAGGCCAGCTCTGTGGTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002409 True 1998 mRNA 0.64 10 13307997 13328399

Neighbor

gene id symbol gene type direction distance location
AMCG00002408 NA coding upstream 3441 13271681 ~ 13304556 (+)
AMCG00002402 NA coding upstream 70592 13228527 ~ 13237405 (+)
AMCG00002401 NA coding upstream 113921 13191029 ~ 13194076 (+)
AMCG00002400 NA coding upstream 166410 13140667 ~ 13141587 (+)
AMCG00002394 NA coding upstream 217614 13089416 ~ 13090383 (+)
AMCG00002406 NA coding downstream 40912 13369311 ~ 13373738 (+)
AMCG00002407 NA coding downstream 47181 13375580 ~ 13376288 (+)
AMCG00002412 NA coding downstream 60786 13389185 ~ 13406063 (+)
AMCG00002414 NA coding downstream 102437 13430836 ~ 13439194 (+)
AMCG00002413 NA coding downstream 112538 13440937 ~ 13455498 (+)
G122929 NA non-coding upstream 2398 13304697 ~ 13305599 (+)
G122914 NA non-coding upstream 118135 13189282 ~ 13189862 (+)
G122911 NA non-coding upstream 119719 13187949 ~ 13188278 (+)
G122876 NA non-coding upstream 240362 13067265 ~ 13067635 (+)
G122868 NA non-coding upstream 255607 13052025 ~ 13052390 (+)
G123039 NA non-coding downstream 217665 13546064 ~ 13546300 (+)
G123041 NA non-coding downstream 238015 13566414 ~ 13570811 (+)
G123043 NA non-coding downstream 244120 13572519 ~ 13590681 (+)
G123169 NA non-coding downstream 1036637 14365036 ~ 14366335 (+)
G123171 NA non-coding downstream 1040694 14369093 ~ 14369913 (+)
AMCG00002393 NA other upstream 178300 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 237165 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 256026 13031759 ~ 13051971 (+)
G122746 NA other upstream 1167532 12133786 ~ 12140465 (+)
AMCG00002360 NA other upstream 1291913 12011971 ~ 12016084 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 999233 14327632 ~ 14361536 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 3629762 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 3647889 16976288 ~ 16985906 (+)
G123807 NA other downstream 4587037 17915436 ~ 17984730 (+)
G123989 NA other downstream 5503615 18832014 ~ 18838531 (+)

Expression


Co-expression Network