G9919


Basic Information

Item Value
gene id G9919
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56690719 ~ 56692519 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12325
GACAGTGAATGTGTATACCCTCTTtattcaaaagcaaaagcacaCCAACAAATAACAATTGCACaaaagactgactgactgtctgacttcctgtctatctatctgtgttTCCCGTATCGGTTGAAGTGCCGGTACAGGAAGCTAATTCTCTTCTCCAGACTgtggaggtcagaggtcatcaTGCGGTCGCCCACCATCTGCTTCTTCCTGATGCAGCGCTGCAGCTCGTTGCCGCGGAATCCCTTCAGCCAACGGGGGGCCACAATCAGGTCCCGGGGGTGGGCCTTGAAGTCGCCTGGACAGCCGTGGGTGGGGAGGAGTCCAGAATGCCTACGTTGTCGTAGAGCCCGTACACACTGCGCTTCTCATTCCAGCGGTCCGTCTGCTTTGGGAGTGGGATCGCGTGCATCCTCACCCTGCTGCACACCCCTGGGTAATCAATAAccaatcaataatcaataaccTCGgatcatgatgatgataatgacaACGACAactatttgtagtagtagtagtagtaataataataataataataataataaacactgacaCTGCTGCTAAGCCCTTGAGGGGAATCAAGCacaaataatcaatcaataaccTATAATCAATATTAAATCATCAATACTGAATGAtctaaataatgatgataatactaAGGATTATGAGAATATCCTGAGCTTACAGCCAACAATGAGATGAccaacaatcaatcaatttcaGTGATAAGTGATATCATCCTGACCTGACAGCATGCTCTGAGACATCATCAATACCcaatcaataatcaatactGATGAatcaataatgaaaaataaaaaatagctaATTATCAGTAAACAATAAACACGAGGGTGATAATAACATCCTGACCGCATAATCAATCACCAATAACTcatgttataatgggggattcaatttcccaaacatagactgggaaagcccggttgggacgacagaggcagaaatagaaatggttgagatggtaaatgactgctttctaactcaatttgtcagggaaccaaccagggagagagcatgcattgacttgatcttttcaaatgaccaagatagagtcagagggacactagttagagaaccaatggcaaattgtgatcacaacatggttagcgttgaggcattctttaaaaaaaacaaggtccaagtatAAAAcgatggtctacaattttagaaaagaaaaccttgaaggtatgaggcggcacttagaagaggtagactggagcacaatggatacagagtcagttgaaaatggatgggtatattttaagaatatactactacaatttgtaccaaaacttgagGAAATTGAGGACCagattgaggaccaaaaaacattggccaaaatggtttaatagaggtatgcaaaaaaatataaagagaatgaaaatgttgtatagcgcatacaaaagggatggagactaaacaaaatacatagaatatgttgagctgcaaagagaccttaagaaagggatcaggaaagcaaagagtgaaatagaaagaaacatagttctggagctaaaactaatgcaaagagcttttttcaatattacaacagcaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12325 True 1583 lncRNA 0.40 2 56690719 56692519

Neighbor

gene id symbol gene type direction distance location
AMCG00004683 NA coding upstream 47437 56634846 ~ 56643282 (+)
AMCG00004680 NA coding upstream 155456 56528156 ~ 56535263 (+)
AMCG00004679 NA coding upstream 167082 56512067 ~ 56523637 (+)
AMCG00004668 NA coding upstream 461005 56227798 ~ 56229714 (+)
AMCG00004670 NA coding upstream 505437 56184424 ~ 56185282 (+)
AMCG00004686 NA coding downstream 19834 56712353 ~ 56720075 (+)
AMCG00004688 NA coding downstream 32334 56724853 ~ 56729833 (+)
AMCG00004687 NA coding downstream 82686 56775205 ~ 56778426 (+)
AMCG00004694 NA coding downstream 121895 56814414 ~ 56820789 (+)
AMCG00004696 NA coding downstream 148597 56841116 ~ 56843730 (+)
G9915 NA non-coding upstream 5981 56683025 ~ 56684738 (+)
G9908 NA non-coding upstream 32447 56657860 ~ 56658272 (+)
G9903 NA non-coding upstream 76261 56614032 ~ 56614458 (+)
G9863 chd4,LOC107587864,LOC107671917,LOC107724784 non-coding upstream 236437 56453374 ~ 56454282 (+)
G9842 NA non-coding upstream 239787 56436762 ~ 56450932 (+)
G9923 NA non-coding downstream 40786 56733305 ~ 56735388 (+)
G9930 NA non-coding downstream 66165 56758684 ~ 56759246 (+)
G9932 NA non-coding downstream 72534 56765053 ~ 56773718 (+)
G9941 NA non-coding downstream 153535 56846054 ~ 56899913 (+)
G9957 NA non-coding downstream 156853 56849372 ~ 56852139 (+)
G9889 NA other upstream 148656 56538254 ~ 56542063 (+)
AMCG00004681 NA other upstream 191135 56490093 ~ 56499584 (+)
AMCG00004673 NA other upstream 330922 56315612 ~ 56359797 (+)
AMCG00004650 NA other upstream 889451 55758271 ~ 55801268 (+)
AMCG00004642 NA other upstream 1077678 55607539 ~ 55613041 (+)
AMCG00004695 gapdh,LOC107596669 other downstream 93333 56785852 ~ 56801892 (+)
AMCG00004700 NA other downstream 168835 56861354 ~ 56867131 (+)
AMCG00004707 NA other downstream 268994 56961513 ~ 57002024 (+)
G9982 NA other downstream 294387 56986906 ~ 56987644 (+)

Expression


Co-expression Network