AMCG00004683


Basic Information

Item Value
gene id AMCG00004683
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56634846 ~ 56643282 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004683
CAATCAGAACGCGAGGCGGCGCTGTTACCAGGCAGAACAGTGACTCCCCTCCCTCGCCAAGCTTCCGTCCTCTCCACCAATCAGAGGGCGGGCTGTGAGGCGGGGTCAGAGACTGTGGTCTATGatcccAGTCGCTCTGGTAGGGTGTCTCTCGCTCCCTCTGAGAAGTCCCTTCGTATTAAGAACCTGGGGGAGAAGGATTTTGGCTTCTATCGGTGTCTGCTGAGAGAAGATAGCAATTCTATAGAAACTATCTACAGACTGAGCAGAGTGACTGTCATCTCCCTCAACCTGACCTCGCCCTTCACTCCGATCGCCTcccagtccctctctctccagtgtgTCTATGATCTCACTTCAGTCTCAGTCAGCGTACAGTGGGTGGGGCCTCAAAACAACCAATTACAGCAGGATGGgcgtctctctctccacactcaCAACAACAGCCTGACCCTGAGGGAGCTGACAGCAAATGATACTGGGAAATGGCACTGCAGACTCAAGTATGATGACAGGCAGACGCTGGCCTCTGTGCAAacttcTCTTCAGCGTACCCCTCCACCATCTTCTCCTTCCCCGGCGCCcgctccctcctcctcccctgcctcctctcgccctctccccctctccctctctcctccctgcgCAGAGCTGGGCTGTTGGCAATAAAGTGGACgttcacccctctctctctctctctctctccctctcctctcctctccctggaAACTGGCGAGATGTGGGGGAACTCGCTAAACCCCCGGTACATCTCCTCATCCCTCCCCCACAATCTGTCCATCACGATAGACAGAATCCAGGAGGGGGACGCAGGGAATTACACGTGCTCACTTTTCTTTAAAGACGGGACTGTCTTACAGAGGACAGTCGAGTTGAACGTGCTGAGAGtcgtCCTCTCTCCCAACGCCACCCTGTTTGAGGGACAGCCTTTCAATCTGACCTGCGACCTGGGCcgacctctgacccctgacctccaGCTGACTTGGACCTACCGACACTTCCTTCAGGGCCTGGTATCCGTGAAGGGGGGGGTAGTGAGCAGGAAGGAGGGAGCGACGGAGCAAGAGAAGGGCCGGTGGAAGTGTAGCATAAAGAAGGGGAATGCAGTGCTGACCTCTGTGGAATTCACTCTGAGGATTGAGCGGGCCCCGGTCAAGGTCTGGCTGCTGGTGCTGGTGTGCTCAGGGGTGTTCCTCTTCCTctcgctcctcctcctcctcatctgtGTCCTGCGGAGGTGCAGACAGaacCACGCGTTCAGGAGGACCAAGAAACGCAAGACAAGATACTGTCGATGCaaacaTCCTCAACCCAAAACGTTCTATGGACCctgagagaaggaggaagagggaagagaggaagagggggaggagaggagaggagaagagagcaGACAGAAGAAGGAGTATTTTCTGGAGGCCAGTTTTGGGACCATGATTGGGAGTAGCTTCTGTTTCTGCTGCCCGGTGTATAATACTGTGTATATACTGCCGCAGAGGACACTGCCGTCGAGTTAGTGTGGGAATACCTCAGTGCGCTGTCAGCTCtttctgagagagggagagagggagaaagaggaggagagtCAGGAGAAATAGGGATGGAGGCAGTCTCTATGATATATCTGTCTATTACAATTTAAGACTCCAATTACTATTCTGATATGAGCAACttttacagtataaatatttatatatatatatatatatatacacaataatacCGGCTAtacttattaattata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004683 True 1762 mRNA 0.53 9 56634846 56643282

Neighbor

gene id symbol gene type direction distance location
AMCG00004680 NA coding upstream 99583 56528156 ~ 56535263 (+)
AMCG00004679 NA coding upstream 111209 56512067 ~ 56523637 (+)
AMCG00004668 NA coding upstream 405132 56227798 ~ 56229714 (+)
AMCG00004670 NA coding upstream 449564 56184424 ~ 56185282 (+)
AMCG00004666 NA coding upstream 457003 56174031 ~ 56177843 (+)
AMCG00004686 NA coding downstream 69071 56712353 ~ 56720075 (+)
AMCG00004688 NA coding downstream 81571 56724853 ~ 56729833 (+)
AMCG00004687 NA coding downstream 131923 56775205 ~ 56778426 (+)
AMCG00004694 NA coding downstream 171132 56814414 ~ 56820789 (+)
AMCG00004696 NA coding downstream 197834 56841116 ~ 56843730 (+)
G9903 NA non-coding upstream 20388 56614032 ~ 56614458 (+)
G9863 chd4,LOC107587864,LOC107671917,LOC107724784 non-coding upstream 180564 56453374 ~ 56454282 (+)
G9842 NA non-coding upstream 183914 56436762 ~ 56450932 (+)
G9852 NA non-coding upstream 206765 56424270 ~ 56428081 (+)
G9841 NA non-coding upstream 211489 56369030 ~ 56423357 (+)
G9908 NA non-coding downstream 14578 56657860 ~ 56658272 (+)
G9914 NA non-coding downstream 37114 56680396 ~ 56721681 (+)
G9915 NA non-coding downstream 39743 56683025 ~ 56684738 (+)
G9919 NA non-coding downstream 47437 56690719 ~ 56692519 (+)
G9923 NA non-coding downstream 90023 56733305 ~ 56735388 (+)
G9889 NA other upstream 92783 56538254 ~ 56542063 (+)
AMCG00004681 NA other upstream 135262 56490093 ~ 56499584 (+)
AMCG00004673 NA other upstream 275049 56315612 ~ 56359797 (+)
AMCG00004650 NA other upstream 833578 55758271 ~ 55801268 (+)
AMCG00004642 NA other upstream 1021805 55607539 ~ 55613041 (+)
AMCG00004702 NA other downstream 20858 56664140 ~ 56896215 (+)
AMCG00004695 gapdh,LOC107596669 other downstream 142570 56785852 ~ 56801892 (+)
AMCG00004700 NA other downstream 218072 56861354 ~ 56867131 (+)
AMCG00004707 NA other downstream 318231 56961513 ~ 57002024 (+)
G9982 NA other downstream 343624 56986906 ~ 56987644 (+)

Expression


Co-expression Network