AMCG00004666


Basic Information

Item Value
gene id AMCG00004666
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56174031 ~ 56177843 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004666
TGGGATTCTGCAGAACTGCGCAAAATATGCGGACTATGCTACAAGGAAGCGAccatctgtttgtttatgtccTTTGTTCCTGAGGTCGCATTTTTATGACGTAATATATGTCCCTGAACAAGAAAAGGAAGTTCCACAGACATCGGTGTTGTCGGatgtattgcatttaaacaGATTCCTGTCGGAAAATAATTGTCCAGCGCGTCATTTGCACCTTTCCAGAACTTACAGCTTTTCTAAAATGTTGGTTTCCTCCAACATTAAGCTGGATTCCAAGCTGACAGTGTCCCTTCTGAAGGGAGCGCTGTCTCCCCATGTGGAGAAGGTCATCAGAGTAGCAGTGGACACATTGCTTCTGGAGATCGAGAGACTCCTTTCCCAAGAGCTTGGGCAGGTGGTGGATGAAAAGCAGAACTCGGGCCTAAGACAGACGGGCCTCGGAGACAGAGGTACTGAGGCTGGCTGCTGGAGTCATGAGACGGTGGTCCCTGAAGAGCCCGTGTGGAGTAACGCCTGGGACCCGCAGTACACAGGAGATTCTAATGAAAATTTAATCAAGGGCCCTAATGATGTTCCTGAGGTAGTGTGTGGATCAGAACAGAATGACAGGGCCACTAATGTACTGCAAGATGCCCACTGTAATGGCATTACATTCTTTAATGATATGATCCCTGGCTTGATACAGAATGCTGGGGACACAGAACCACAAGACAAGCCCTTTAACCAAGGTGGTAATGAGGACACCCCTAAACTGGCAGACAGGGAGGTGAAAGAGGAGCCCAGGGATGACGAGGGGGATGTGATTGAAGTTAAGGTTCCCGATCAGGTACACGTCTCTGCTGCCCTCCTTGCCAACACTGGCCTGGGCAAGAGCCCTGGCCCCTACCCCTTCTCCTGCCCTGAGTGCCATCTTGTCTTCTCCTGCCCCAGTGAGCTCCGTGAGCACAGATGGGCGACTCACTGTGGAGACAGGCCCTACTGCTGCTCCGAGTGCGGTAGGGGCTTCTCTCAGCTTGCCAATCTCAAGAAGCACTACCTCATCCACACTGGAGAGAGGCCACACCACTGCACCCAGTGCGGCAAGAGCTTCCGCCACCTGTGCAACCTCAACAAGCACCGGCTGGTCCACACAGGGGAGCGGCCCTTCCCCTGCACCCAGTGTGGCAAGAGGTTCCGCCAGCTGCCCCACCTCAAGGAGCACCAAGGGGTCCACATAGGGGCAAAGCAGTTCCACTGTTCTGTCTGTGGCAAAAATGTCAGCTCCCGTTGGTATCTGAAGAGACACCAGCAAGCCCACCATGAGCAAAACCTCTGCTAGCCTTGAAACCCCCTGTGTCTAAGTGACAtgctgataaaaacaaattccattGTATTTTTGGGAACCTTTAGGGCacctgtgtttgcatgtgtaaaATGCTTGTTGGCTACCTGAAAAGTGAATCTGTGTTTATTCTTATCATATATTTTGTCAGCATTTTTGGGAGTGAGCTATGTCATGTCATATCCTGCTTGCAGAACTTCTGTCTCCTTTTTGAATCCATatcacaacaaataaacaaacaaagctgaGGCCAGTGATTTCACAAAGTGTGGTGAAAGGAAGGAATGTATATACAGTAGGACTCCCAAAACATATCCACATAACAACTGACATTGGGAGtagagaataaacaaacaaacaaaccaaaaaaggatAATGAGTTGCAGTACAGGGACAGACCCCTTTTTCATTGGAATTGAAACTCTTAGAAAGCACAATCACAACAGATGGCACCAAGTGTACAACATGTGAACAGTATATAGGAACTGTAGTAAAACACACTGATGTGTAACTTTAAGCAAATTGTTTCTTAAGGCACATTGTGTGATTTTGTTCAATGCATTACATACAAAATGCAGAttgattttaaagaataaataaatcaagatacGCTTAACATCTCTATAAACAGGACAGTTTTCAAACAGACAAAATGTATACTCAGTCCTTTTTATTCAGGCatatcattgtatttataatatgatgttcccattaaattacaaatgttttggtg

Function

GO:

id name namespace
GO:0044428 obsolete nuclear part cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004666 True 2054 mRNA 0.46 3 56174031 56177843

Neighbor

gene id symbol gene type direction distance location
AMCG00004669 NA coding upstream 28267 56132561 ~ 56145764 (+)
AMCG00004667 NA coding upstream 43655 56118264 ~ 56130376 (+)
AMCG00004661 NA coding upstream 83636 56085786 ~ 56090395 (+)
AMCG00004656 NA coding upstream 90646 56066463 ~ 56083385 (+)
AMCG00004659 NA coding upstream 114060 56039875 ~ 56059971 (+)
AMCG00004670 NA coding downstream 6581 56184424 ~ 56185282 (+)
AMCG00004668 NA coding downstream 49955 56227798 ~ 56229714 (+)
AMCG00004679 NA coding downstream 334224 56512067 ~ 56523637 (+)
AMCG00004680 NA coding downstream 350313 56528156 ~ 56535263 (+)
AMCG00004683 NA coding downstream 457003 56634846 ~ 56643282 (+)
G9814 NA non-coding upstream 62659 56110357 ~ 56111372 (+)
G9752 NA non-coding upstream 256822 55910752 ~ 55917209 (+)
G9749 NA non-coding upstream 277508 55895668 ~ 55896523 (+)
G9723 NA non-coding upstream 315634 55810383 ~ 55858397 (+)
G9721 NA non-coding upstream 384974 55788809 ~ 55789057 (+)
G9841 NA non-coding downstream 191187 56369030 ~ 56423357 (+)
G9852 NA non-coding downstream 246427 56424270 ~ 56428081 (+)
G9842 NA non-coding downstream 258919 56436762 ~ 56450932 (+)
G9863 chd4,LOC107587864,LOC107671917,LOC107724784 non-coding downstream 275531 56453374 ~ 56454282 (+)
G9903 NA non-coding downstream 436189 56614032 ~ 56614458 (+)
AMCG00004650 NA other upstream 372763 55758271 ~ 55801268 (+)
AMCG00004642 NA other upstream 560990 55607539 ~ 55613041 (+)
AMCG00004644 NA other upstream 568546 55568132 ~ 55605485 (+)
AMCG00004634 NA other upstream 714627 55376095 ~ 55459404 (+)
AMCG00004632 NA other upstream 812322 55295175 ~ 55361709 (+)
AMCG00004673 NA other downstream 137769 56315612 ~ 56359797 (+)
AMCG00004681 NA other downstream 312250 56490093 ~ 56499584 (+)
G9889 NA other downstream 360411 56538254 ~ 56542063 (+)
AMCG00004702 NA other downstream 486297 56664140 ~ 56896215 (+)
AMCG00004695 gapdh,LOC107596669 other downstream 608009 56785852 ~ 56801892 (+)

Expression


Co-expression Network