Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009138 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 26801474 ~ 26801849 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009138 | True | 267 | mRNA | 0.55 | 2 | 26801474 | 26801849 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009128 | srprb | coding | upstream | 15684 | 26782537 ~ 26785790 (+) |
| AMCG00009122 | fam168b,LOC107560647,LOC107590359 | coding | upstream | 158003 | 26636487 ~ 26643471 (+) |
| AMCG00009123 | pak2 | coding | upstream | 226032 | 26565688 ~ 26575442 (+) |
| AMCG00009116 | NA | coding | upstream | 263232 | 26532448 ~ 26538242 (+) |
| AMCG00009115 | NA | coding | upstream | 272983 | 26521864 ~ 26528491 (+) |
| AMCG00009130 | neu4,LOC106581489,LOC102793282 | coding | downstream | 28350 | 26830199 ~ 26836417 (+) |
| AMCG00009139 | NA | coding | downstream | 96760 | 26898609 ~ 26903272 (+) |
| AMCG00009140 | psmd2,LOC106613117 | coding | downstream | 168036 | 26969885 ~ 26981851 (+) |
| AMCG00009145 | NA | coding | downstream | 193109 | 26994958 ~ 27032957 (+) |
| AMCG00009146 | NA | coding | downstream | 235480 | 27037329 ~ 27058960 (+) |
| G54777 | NA | non-coding | upstream | 141128 | 26650482 ~ 26660346 (+) |
| G54724 | NA | non-coding | upstream | 261274 | 26538319 ~ 26540200 (+) |
| G54711 | NA | non-coding | upstream | 310313 | 26489149 ~ 26491161 (+) |
| G54705 | NA | non-coding | upstream | 393660 | 26407537 ~ 26407814 (+) |
| G54609 | NA | non-coding | upstream | 1280160 | 25521019 ~ 25521314 (+) |
| G54812 | NA | non-coding | downstream | 20447 | 26822296 ~ 26824929 (+) |
| G54833 | NA | non-coding | downstream | 47373 | 26849222 ~ 26851003 (+) |
| G54880 | NA | non-coding | downstream | 180994 | 26982843 ~ 26984157 (+) |
| G54928 | NA | non-coding | downstream | 294688 | 27096537 ~ 27096773 (+) |
| G54936 | NA | non-coding | downstream | 309031 | 27110880 ~ 27117923 (+) |
| AMCG00009129 | NA | other | upstream | 4706 | 26793537 ~ 26796768 (+) |
| AMCG00009108 | NA | other | upstream | 1213859 | 25584882 ~ 25587615 (+) |
| AMCG00009104 | NA | other | upstream | 1307901 | 25489711 ~ 25493573 (+) |
| AMCG00009088 | LOC104966806,LOC108444346 | other | upstream | 1883611 | 24898116 ~ 24917863 (+) |
| AMCG00009085 | NA | other | upstream | 1984940 | 24812618 ~ 24816534 (+) |
| AMCG00009164 | NA | other | downstream | 811734 | 27613583 ~ 27626011 (+) |
| AMCG00009204 | NA | other | downstream | 1964605 | 28766454 ~ 28799600 (+) |
| AMCG00009207 | rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 | other | downstream | 2127043 | 28928892 ~ 29011768 (+) |
| AMCG00009208 | NA | other | downstream | 2301759 | 29103608 ~ 29108227 (+) |
| AMCG00009220 | lsm2,LSM2,smx5 | other | downstream | 2369474 | 29171323 ~ 29174731 (+) |
