XLOC_006046 (myofl)


Basic Information

Item Value
gene id XLOC_006046
gene name myofl
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 29238850 ~ 29288902 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011928
ATGTTGAGGGTGGTTGTTGAATCCGCCAAAGGAATTCCTAAAAAAACTATTGGAGTTCCAGATCCTATAGCAGGAATCATCTTTAGGGgtgaaaaaaagaaaacaaaagcaatTGACAAGGAATTAAACCCTGTTTGGAATGAGATAATTGAGTTTGATTTAAAGGGGTCCCCTTTGGATTCCTCGTCATTCATTGAAGTGGTTGTGAAAGACTATGAAACCATTGGAAAAGACAAATTTATTGGTTCTGTAAAGATATCTCTCAAAGAGTTGGCTGCTGGTCAGACCAGATCTCTTGCTTCTAAGAACACTCCTCTAATTAATGAGAAGAAACAGGAAATTGGGGCAACTATCAATTTAACAATTGCCTATGAGCCTCCTGCAAGTACCGTCCCAAACCTGAATGATCAAAACACTGGAGAGGCTAACACTAAAGATACTGGAGAGGAGAAAGCTGCTGACAGTGATGAAGATGCAGGTGATGTGGCCGATTCAGGGGCACCTGGAGTTTCTCCCACAGGACAGCCTGGAAAAAAAGACTCCAAAAAGGTGGTTCGGACAACTCGAAAGCGGCAGAAAGCTCTGGCCAACAAACCCCAGGATTTCCAAATTCGTATTCGAGTAATCGAGGGTCGACAGTTACCCGGCAATAACATAAAGCCTGTCGCCAAAGTAAGTGTGTGTGGACAGACACACAGAACGAGAATCCGAAGAGGAAACAATCCATTCTTTGATGAGATCTTCTCCTACAATGTCAACATGCTGCCTTCTGAGCTTTTTGATGAGAGTTTTTGGTTTATGATAATGTTTGCTGTGTCTCTGAAAGGTCATGCAATCATGAGAAAGTGGCTACTGTTAGGTGACCCAGATGATGCTGTCTCTGGAGCCAGAGGTTATCTGAAAGTCAGCATGTTCATAGTAGGAACTGGAGACGAGCCTCCGGTGGAAAAGCGAGAAGCCAACGAGGAACAGGATGACATTGAAAGCAACTTGCTGCTGCCAGCAGGTGTCGCTTTACGATGGGCTACACTGAGTCTGAAAATCTACCGGGCCGAGGACATGCCACAGATGGATGATGCCTTTGCTCAGACAGTAAAACACATATTTGGTGGAACAGACGACAAGAAAAATTTGGTGGATCCTTTCGTAGAAGTCAATTTTGCAggcaaaaaaGTGTGTACTAAGATCATAGAGAAGAATGCAAACCCAGAGTGGAATCAGCTGATTCACCTGCAGGTTAAGGTAGGAAGGCTGATGATAACTATGTtacattttttagatgttagtttcagtAATGATGTTATTGGGACCAcgtaccttaatctgactaaaatAGCTTCATCTGGCGGAGAAATTGAGGAAACACCCTCAGAAAATGGACTGCCATCTTCCTTTAATGTGGACACCACAGAAGCCGAAGTTGGCTTTCTTCCAGCCTTTGGGCCTTGTTATATTAACCTTTATGGAAGTCCCAGAGAATTTACTGGCCTACCTGACCCATATGAGGATCTGAATTACGGCAAGGGTGAAGGGGTCGCATACCGGGGAAGGGTCCTGATCGAGCTCTCCACTCAACTCAATGACAAAACTGACAAGAAGGTGGAGGACCTTTCCAACGATAACATTTTAGTGGCACAGAAATACCAGCGGAGAAGGAAATATTCCTTATGTGCAGTGTTTCACAGTGCCTGCATGCTTCAAGAGCCTGGAGAACCGATTCAGTTTGAGGTCAGCATAGGAAACTATGGAAATAAACTGGACTCCACATGCAAACCACTGGCCTCTACTACTCAGTACAGCTGTGCTGTTTTTGATGgaaATCACTATTATTACTTGCCCTGGGCTGATTCTAAGCCTGTTGTTATCCTCACATCTTTCTGGGAGGACATAAGTCATCGTTTGGATTCAGTGAACATCATTCTGTATATTTCTGATCGACTGCAATCCAACATCATCTCTCTAAAGACAGCCATCTTAGCGAAAGTGTCTGACGCTCGCCTGGCTGAGATTTGGCTGAAACTTGTCACCCAAGTCATCGATGACCTTTCTAGTTACCAGTTACCAGATATGGAGGGTAAGCCAAATCTGACAGCACTTGATATTCAAATCAAGAACCTGCGAGACAAAACCATGACCAGTGTAAAGGAGGCAGCCATTCGCATGAGGGAGGAGGCTGTTGATGTTAGAGCCACGATGCCCGATATAGAGGACTGGCTAGATCGGCTGCAGCAGATCTCAGAGGAGCCTCAGAACAGTATGCCGGATGTCATCATATGGATGCTGAGAGGAGAGAAACGTGTTGCCTACGCCCGAATCCCAGCCAATCAGGTGCTGTACACCACCCACAGCGAACAGGCCATTGGAAAATACTGTGGCAGGACACAAACAATCTTCATGCAGTATCCAATGGACAAAAATAAAGGCCTCAAGATCCCAGTGCAGCTGCGTGTGAACATGTGGCTTGGCTTATCTGCACATGAAAAGAAGTTCAACACCTTTGCAGAGGGAACGTTCAGTGTATATGCAGAGATGTATGAGAACCAGGCTCAGGTATTTGGGAAGTGGGGTAGCACTGGTCTTGTTAGCAGGCACAAGTTTTCAGACGTGACGGGGAAAGTGAAACTAAAGCAGGAACGATTCATGCCGCCCCGGATTAATGATAACTGCAAAATAtcaatTCTGCTCACAGAGGCTGATGCGGGACACTCTGAATTCACTGATGAGGTTTACCAAAACGAAACCCGCTTCCCTGGTGGTGAATGGAAATCTGCAGCTGAGCCTTACACTGATGTGAATGGAGAAAAGGCACAAAGCCCGGAGGAGATTGAGTGTCCCACCGGATGGATTTGGGAAGATGGCTGGAATTTTGACAGCAACAGAGCAGTGGATGAAAAAGGATGGGAATATGGAGTCACGATTCCTCCTGATGATAAGCCCAGGTCTTGGGTTGCTGCTGAGAAAATGTACCACATCCATCGTAGGAAAAGACTGGTGCGATCCCGCAGAAAGACATCAGAAGCACCAACTATAGAGaagaaagacatcgGTGATGGCTGGGAATACTCgtctctgattggctggaagttCCACAGGAAGGAACGTTCTTCAGACACTTTCCGCCGCAGACGCTGGAGGAGGAAAATGGCACCATCTGAACGTGTGGGAGCGTCGGCAATCTTTAACCTTGAGGGAGCTTTGGGAATAGACGATGATGAGAAAGGCAGCAAAAAGGACTCGGCTAAACTCTTTGGTGCCAACACACCCACTGTGTTTTGCCGATTTGACAAGTCATTCAGCTACCATCTCCGAGTCTATGTCTATCAAGCCAGGAACCTTCTTCCTATGGACAAGGACAGCTTTTCTGATCCTTATGTGCATGTGTCTTTCCTGCATGCCAGCAAGACCACAGAGATCATTAAATCCTGCCTCAATCCCACATGGGACCAGACCCTCATTTTTAACGACATCGAAATCTATGGAGACCCTCAGACCATTGCTTATAACCCACCCAATGTTGTTCTAGAGATTTATGACAGTGACCAAATGGGGAAGGATGAGGCGATGGGCAGATGCACCTGTCCTCCAGTGGTGAAGCTAAACCCTGCCAACCCATTAATACCTAAACTCTTTTGGTTTCCCATCTCCTTGAAGGGACGAAGTGCAGGGGAGATGCTGGTAGCAGCTGAGCTCTTGCTCAAAGAAAAGGCAAATGATGCTAACCTGCCTCTGGTCCCACCGAGAAGAAGTGAGAATCTGTACATGGTTCCTCAGGGAATCAGGCCTGTGGTACAGCTCACGGCAATCGAGATCCTGGCCTGGGGATTAAGAAACATGAAGGCATATCAGCTGGCAGCGGTGTCTTCCCCCAGCCTGGTAGTTGAATGTGGAGGGCAGATCATTCAGACTGCCACTATAAAGAACATCAAGAAGAATCCCAACTTTCCTGGTTCCGTCCTGTTCCTCAAAGTGCTTCTCCCTAAAGATGAGATGTACACTCCACCCATCGTGGTCAAAGTTATTGACCACAGGCCCTTTGGGCGGAAACCAGTTGTTGGGCAGTGCACTATAAACTCCCTGGAGGAGTTCAGATGTGATCCTTACATTGACACTACCGAGGTGGCTATGTCTGCAAAGGTGGCTATGATGGCGGCGGCTCCTCGAGACGTTGTTATTGATATGGGGGACAGAATCCCCAGCCCTTCCAAACAGGAAGAGGACACGGTGGACTGGTGGAGTAAATTCTATGCCTCCATTAACGAGCTTGAGAAATGCGGCCCTTATCTCCAGAAGGGATATGACACCTTAACAgTCTATAACACAGAGCTTGAGGCGGTTCCTGAATTCAGAGGTCTGACAGATTTTTGCAATACATTCAAACTGCAGAGGGGCAAATTGGAGGACGAGGAGGAAGACCCGTCTGTTGTAGGAGAGTTCAAGGGCTCGTTTCGAGTGTATCCCTTGTCAGATGACCCAAACATCTCAGATCCACCTCGGCAGTTTAGAGAGCTGCCTGAAAGCTGTCCTCAGGAGTGCCTGGTCAGAATCCATATCATACGTTGCCTCGACCTGCAGCCTAAAGACAACAATGGCATGTGTGACCCTTACATAAAGATTTCCCTGGGGAGGAAAACGATTGATGATAGAGATCACTACAAGCCAAATACTCTAAATCCAGATTTTGGGAGGGTGTTCGAACTGAACTGCTACATCCCACAAGATAAGGACTTGAAGATTTCAGTCTATGACTATGATCTGCTCAGCTCTGATGAGAAGGTTGGGGAAACAGTCATTGATCTTGAGAATCGACTTCTTTCTCGGTTTGGCTCTCATTGTGGAATCCCAAAATCATACTGTGTATCTGGAGTGAACCAGTGGAGAGACCAGCTCAAACCTTCACAGATCCTGCAGAATCTGGCCAGGATGAGAGGAATTCTTGCTCCTCAGATCTCAGATGATGGTAGTTTCTTGGCTTTTGGAGGACGAGAGTACAGGCTGGATGAACTGGagGCCAATAAAAGCATCCATCCACACCTGGGACCTCCTAAGGAGCGAATTTGCTTGCATGTGTTGAGGAGACAAGGCCTTGTCCCAGAGCATGTGGAGACCAGAACCTTGTACAGCAGCTACCAGCCCACGCTCTCTCAGGGCAAAATTCAGATGTGGGTTGAAATATTCCCTAAAAACCTTGGCATTCCTGGACCACTCTGTGACATCACTCCTCGCAGACCCAAACAGTATTTCCTGCGAGCTGTTGTTTGGAATACAACTGAAGTCATTCTGGATGAAACCAGCATCACAGGAGAAAACATGAGCGACATCTATGTGAAAGGTAATTTATATTCCACTgccatttacagtttttttctcagtggctttggtgcatttctcacaacactatttacagttgcacaacagttaatgcatttgtcaaaacaatttGAACATTTCTGGAGTCTGGACAAAACCGAGTTTAGGATCCCTCCTAAACTCACTATTCAGATTTGGGACAATGACAAATTCTCCCTGGATGATTACTTGGGCACAGTGGAGTTGGATTTGCTTCACCTCATCCCTCCTGCTAAGACCCCTGAAAAGTGTTCTCTAAGCATGCTAACACAAACAGGCAAAAACCTGACGCCTTCATCGCTCTTCTCCCAGAAGTCAGTGAGAGGCTGGTGGCCTTGTGCTATGGAGGAAAATGGCAAAAAAGTCTTGGCTGGTAAAGTGGAAATGACTCTGGAGGTGGTAGAGGAGAAAGAGGCGGATGAGAGGCCTGCTGGGAAAGGAAGAGATGAACCCAACATGAACCCCAAACTAGAGTCTCCAAACCGTCCAGATACATCTTTCCTTTGGTTCACAAATCCATGCAAGACCATGAAGTTCATCGTGTGGCGCAAATACAAATGGCTCTTCATTGGATTAATTATTCTCATACCTGTGATCCTGTTTATTGGAATCCTTTTGTATTCTTTCCCGAACTACCTTTCCATGAAACTCGTAAAGCCATTTTAA

Function

symbol description
myofl Predicted to enable metal ion binding activity. Predicted to act upstream of or within myoblast fusion. Predicted to be located in cytoplasmic vesicle membrane and plasma membrane. Predicted to be integral component of membrane. Orthologous to human MYOF (myoferlin).

GO:

id name namespace
GO:0007520 myoblast fusion biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-111116-2 Predicted to enable metal ion binding activity. Predicted to act upstream of or within myoblast fusion. Predicted to be located in cytoplasmic vesicle membrane and plasma membrane. Predicted to be integral component of membrane. Orthologous to human MYOF (myoferlin).

Ensembl:

ensembl_id ENSDARG00000017128

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011928 True 6012 mRNA 0.46 51 29238850 29288902

Neighbor

gene id symbol gene type direction distance location
XLOC_006045 unc5b coding upstream 11047 29127960 ~ 29227803 (+)
XLOC_006042 NA coding upstream 141324 28915538 ~ 29097526 (+)
XLOC_006044 NA coding upstream 155559 29083087 ~ 29083291 (+)
XLOC_006043 CU639469.2 coding upstream 313885 28924846 ~ 28924965 (+)
XLOC_006041 ly6pge coding upstream 324413 28903959 ~ 28914437 (+)
XLOC_006047 parga coding downstream 3109 29292011 ~ 29349324 (+)
XLOC_006048 ogdhl coding downstream 63940 29352842 ~ 29406695 (+)
XLOC_006049 NA coding downstream 157915 29446817 ~ 29449721 (+)
XLOC_006050 lrit1a coding downstream 173347 29462249 ~ 29467558 (+)
XLOC_006051 lrit2 coding downstream 181540 29470442 ~ 29474304 (+)
XLOC_006039 NA non-coding upstream 420968 28808092 ~ 28817882 (+)
XLOC_006037 CU640488.1 non-coding upstream 498481 28740235 ~ 28740369 (+)
XLOC_006053 CT025909.1 non-coding downstream 302092 29590994 ~ 29591115 (+)
XLOC_006054 CT025909.2 non-coding downstream 466391 29755293 ~ 29755427 (+)
XLOC_006056 NA non-coding downstream 600287 29889189 ~ 29891820 (+)
XLOC_006063 AL929330.1 non-coding downstream 962839 30251741 ~ 30251857 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_09894361_09922003 MYOFL coding CI01000012 null 9893656 ~ 9922443 (-)