AMCG00010964


Basic Information

Item Value
gene id AMCG00010964
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 5977850 ~ 5987680 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010964
AtggtgcagcagcagcaaatgACCACCTCAGCCATAAGAACAGCAGCTGAACCTTCAACATCTTTGCTTGACTCACTCCTTGAGTCTGGAGGCAGCAGTGAGGAAGACAGCAGAGAGGAGAAAGCTGAGGAGGACCTCAACActcaaataagaaataaagtcCTGGCTTACTTTGTTGAGAGACCCCTAGCCAAGGATGAAAATCCTTTGGACAGCCAGTGTCCAGGGCCCCTGGACGATGTGGTGGGGGATGAAGCAGACGACAAAGACCACCAGCACCGCGCACACCATCCACAAGGCTCTCTGCTTGACCCCTCTCTTCCGGCTTCCCTGCTGTTTCACCGTCTGGGAGAGCAGAGTGCGGATGATGAGGAGGTTGCAGACCACCACCAGGAGGAAAACGCAGAAGAACATGCCAATTACCACGAAATTGAGGACGGCCACTTTTTTCTTTGCTGA

Function

GO:

id name namespace
GO:0050896 response to stimulus biological_process
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010964 True 459 mRNA 0.53 2 5977850 5987680

Neighbor

gene id symbol gene type direction distance location
AMCG00010967 NA coding upstream 35 5977080 ~ 5977815 (+)
AMCG00010963 NA coding upstream 17878 5950426 ~ 5959972 (+)
AMCG00010962 NA coding upstream 38490 5934098 ~ 5939360 (+)
AMCG00010957 NA coding upstream 376637 5599919 ~ 5601213 (+)
AMCG00010956 NA coding upstream 377982 5593933 ~ 5599868 (+)
AMCG00010969 kdm1a coding downstream 47811 6035491 ~ 6051667 (+)
AMCG00010974 NA coding downstream 421238 6408918 ~ 6411796 (+)
AMCG00010981 NA coding downstream 505936 6493616 ~ 6509962 (+)
AMCG00010986 fabp3,LOC108426441,LOC105892250,LOC107669374 coding downstream 767244 6754924 ~ 6762123 (+)
AMCG00010989 snrnp40,LOC107593559,LOC106588762 coding downstream 787884 6775564 ~ 6782856 (+)
G103413 NA non-coding upstream 11911 5963089 ~ 5965939 (+)
G103360 LOC101158568,LOC103376478,LOC107695181,LOC102780806 non-coding upstream 283728 5669125 ~ 5694122 (+)
G103354 qki,LOC106922399,LOC103458862,LOC103144233,LOC107094928,LOC101469882,LOC107721620,LOC106947196,LOC107590898,LOC107697705 non-coding upstream 325029 5617058 ~ 5652821 (+)
G103348 NA non-coding upstream 364416 5550058 ~ 5613434 (+)
G103333 NA non-coding upstream 517277 5456358 ~ 5460573 (+)
G103431 NA non-coding downstream 39280 6026960 ~ 6029057 (+)
G103459 NA non-coding downstream 165313 6152993 ~ 6153266 (+)
G103463 NA non-coding downstream 267544 6255224 ~ 6255538 (+)
G103470 rpl13a,LOC107720993 non-coding downstream 412958 6400638 ~ 6404303 (+)
G103501 NA non-coding downstream 525632 6513312 ~ 6513818 (+)
AMCG00010922 NA other upstream 1335447 4634472 ~ 4642403 (+)
G103078 NA other upstream 1894264 4049938 ~ 4083586 (+)
G103030 NA other upstream 2397573 3577235 ~ 3580277 (+)
G102947 NA other upstream 2534316 3436618 ~ 3443534 (+)
AMCG00010888 NA other upstream 2549421 3421082 ~ 3428429 (+)
AMCG00010979 NA other downstream 399356 6387036 ~ 6395484 (+)
G103542 NA other downstream 654303 6641983 ~ 6642628 (+)
AMCG00010990 pum1 other downstream 904717 6892397 ~ 6920931 (+)
AMCG00010994 NA other downstream 1083753 7071433 ~ 7103508 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 2560683 8548363 ~ 8552605 (+)

Expression


Co-expression Network