AMCG00010956


Basic Information

Item Value
gene id AMCG00010956
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 5593933 ~ 5599868 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010956
ATGGTGGCCTTTCTTCGGGGAATGACCCGAAAACAATGCTGGTCAAAACGGTATACTTCAAAAGGGCGTGGGCAGTCAGGCTACCCGAAAGAGAATTACACAGCAAGCCTCCTAACAGCCTCGCTGCCTCGAGACAAGAGCCCAGGACCggaggcagggaggcagggggCAGCGTGTGGACCGGCGCTGTTCAGAGCGGTGAGCGTGGTCTTGGCTACCGTCAGCAGGGTGTGCGATGAAGATATCTGGGCGTGGGATAATGGACTTGGAGCATCCCAGTCCCACTTCTACCACTACATTGTCACATTCTACTGGGCCATAACTACGATGACGACCACAGGGTTTGGTGATATTACGGCCAGCACTCCTTCAGAGCAGTTAGTGACCATCTTTAACAATCTCAGAGCCGTGACCCAATTAATGAAAAGCCACAAGCTCAGTCAGTCTCTGCAGGACAGGGTGATAGATTACATGAGCCTTCTTTGGGAGAAATACCAGGGGCAGGCATTCCCAGGCGGCCCTTTCCTGATGCACAACCTGCCTAGTAAGCTGCAGGAAGTCATCCTCATTATCCACAATGTACTTCTATCACAGAGGAGAGATCATATATACAAAGACTGCACTTGTAAAATCTTCTTCATCAAGGAGAGAACTTGTCAGATAAATTGTCATTTAAGATCTGACATTATGGGATTTCTACGCGCAGGAACATATTTTGGAGAGGGTGGGTTCTTATACAGGAAACCGGCACAAAGGATTGTGCATGCCCAATCAATGTGCCAGGTTATTGACTTTGACAGACTGAAACCAATTCTTGACAAACATCCAGTCACTAAAAGCCAATTCAAAAGACTGCAGGCAGAGTGTCTTCAGTCCTCTGAATGTGTATGGAGGAGAAAGGAACCGCAgataattaaaactgtaaaccTGTTTTGTGTTGGCCGCCAATTCCAAGAAAAGTACAAATGCTACGTTGAGGACTTCCGAATCTTCGAAATGTATGTGGGCAATGAAGAGGAGCATGTAGAGGCTCTCAGTCAGACTCAACCAGAGCTGTTCTTCTCTCATACCCTGCCACGAGCTTTCCTCATGCGGTGTGCTATAATACCCAATGGCTCACGTCTTTTCTGGTGGGTGTGTTTCTGTCTCCTCCTGGAGTTAATGATCTGCATGGTGTCTTCCCTCCTGTGGTCATTCCTGCACTTTCAACAAGACCTTTGGAAAGCCTTAGTCTTCCTGCTGATCGTCTGCTGGATTGACACATACATTCGGCTGCATGTGACGTTTTCTCGGGGCTCCAGGGTGGTAGTGGATACCATGGAAACAGCCAAGCAATACCTGAAGACCGCCTTCCTGATGGACTTCGTGAGGCGCATGCATGGAACTGATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010956 True 1392 mRNA 0.48 5 5593933 5599868

Neighbor

gene id symbol gene type direction distance location
AMCG00010951 NA coding upstream 82251 5504377 ~ 5511682 (+)
AMCG00010942 NA coding upstream 309635 5283816 ~ 5284298 (+)
AMCG00010943 rps6ka1,LOC107654838,LOC107721568,LOC107711701,LOC107697698 coding upstream 319801 5255095 ~ 5274132 (+)
AMCG00010935 NA coding upstream 424326 5166594 ~ 5169607 (+)
AMCG00010936 NA coding upstream 433489 5160010 ~ 5160444 (+)
AMCG00010957 NA coding downstream 51 5599919 ~ 5601213 (+)
AMCG00010962 NA coding downstream 334230 5934098 ~ 5939360 (+)
AMCG00010963 NA coding downstream 350558 5950426 ~ 5959972 (+)
AMCG00010967 NA coding downstream 377212 5977080 ~ 5977815 (+)
AMCG00010964 NA coding downstream 377982 5977850 ~ 5987680 (+)
G103333 NA non-coding upstream 133360 5456358 ~ 5460573 (+)
G103316 id3,LOC102304963,LOC106610662,LOC101474249,LOC100706678 non-coding upstream 238269 5353769 ~ 5355664 (+)
G103258 NA non-coding upstream 453212 5134227 ~ 5140721 (+)
G103152 NA non-coding upstream 974277 4536337 ~ 4619656 (+)
G103150 NA non-coding upstream 1155797 4437877 ~ 4438136 (+)
G103354 qki,LOC106922399,LOC103458862,LOC103144233,LOC107094928,LOC101469882,LOC107721620,LOC106947196,LOC107590898,LOC107697705 non-coding downstream 17190 5617058 ~ 5652821 (+)
G103360 LOC101158568,LOC103376478,LOC107695181,LOC102780806 non-coding downstream 69257 5669125 ~ 5694122 (+)
G103413 NA non-coding downstream 363221 5963089 ~ 5965939 (+)
G103416 NA non-coding downstream 367649 5967517 ~ 5990587 (+)
G103431 NA non-coding downstream 427092 6026960 ~ 6029057 (+)
AMCG00010922 NA other upstream 951530 4634472 ~ 4642403 (+)
G103078 NA other upstream 1510347 4049938 ~ 4083586 (+)
G103030 NA other upstream 2013656 3577235 ~ 3580277 (+)
G102947 NA other upstream 2150399 3436618 ~ 3443534 (+)
AMCG00010888 NA other upstream 2165504 3421082 ~ 3428429 (+)
AMCG00010979 NA other downstream 787168 6387036 ~ 6395484 (+)
G103542 NA other downstream 1042115 6641983 ~ 6642628 (+)
AMCG00010990 pum1 other downstream 1292529 6892397 ~ 6920931 (+)
AMCG00010994 NA other downstream 1471565 7071433 ~ 7103508 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 2948495 8548363 ~ 8552605 (+)

Expression


Co-expression Network