AMCG00011067


Basic Information

Item Value
gene id AMCG00011067
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9435209 ~ 9439791 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011067
GGCTAATTTTACTATAAAGGTGCCGCTTCAGAGTGCCCCTATTATCGCTTGAATCGAACACTTTTTGGAGATAAGAGTGATCCGCCGACTGTGACGTTAATCTTGATTATTTTCCAAATAACATTAACTCGAAGTAAACATGCAGCAGCTTTTTACTGTGGCTGAATTTGCGCTAATTTTATATGGGTACGTCTGTGCTGGGAAGAGTAACGGTACCGGGCTAAAGAGCAAGGGGAGACTGGCGGAATGGGATGATCCAAACTGGCCTGTTGATGTCGACCAGGGCGAGGGGGACCCGCTGTTTCCGTCGGGGACACCCCCCAATCAAATGCCTGTTCCGAAGCCACCGTTTTATAGGTACGTCCCCATTGCAACCCACTGGCGCACTCCTGTGGTCGCGAAGGAGCGCTTAATGCCAGTGCGGGGGAACCTGCCCCTGCCCACCGACATCCAGCGGATCCTGTTCCCGCCCCGCCACTACCCACAGCCCCTGAACCCCTTCCGACCTCGACGGCCTCCCCCAGCAGTGTCCGCATGGTGCAGCAACAGCAAAATGCACGTTAGGGTGCAGAAGAACTTGTATAGCCGTCAATCTCGCCATCTGACCCTGGGAGTGGGATGCAAGAGCAACTTGGAATcgaaatactactactacttcaaCTATGGCCTCCATGAGTGTGGCAGCAATCGATCGGTTATCAATGGACAGCTGACCTACTCCAATATCCTCCACCACACACCACCCAAAACAAAAGGCCCAGTTCACCGCTCCCTGCCATTCAACCTGTCCATCCAATGCCGATACAACCGGTTCCACCAGGTGTATAAGGTTGGCTATCGTGCTCTGTTGCCCAGGAATTACCACTtcagaaatctgaaaaataagcACAGCTTTGTCCTGAGCACTGCCAATGCTGACTGGACCAGACTATCTTCAAGGAATGCCTATGATCTTGGGCAGCCCATGTATTTCCAGGCCACTGCATACTTTGTTTCTGAAGAACAAAGACTCTTCATCCACTGGTGCTATGCTACTTTGTCCCCTAATCACTTTTCAGAACCCAGGTTCAAGGTGATTGACAACTTTGGATGCATGATTGATAGTAAGCTGGAAAACTGCCATTCCAAGTTTGTGCCCTCAAAGAGCAAAGATGTCGTCCGGTTTGTCATTGATGCCTTCCAGTTTGATAAAAAGCGCCTCCAGTGGAATTCCTCTTATGTAGTAGCCCATTTGCACTTTTCCAATGGTACCATTCCTTTACCCAAGAAATCCATGCTGTATCTGCACTGCAACATGGCTGTGGCAGGGACTGAAGCCACTGTGGGGAACAAAGCCTGCACCTataacaaactaaacaaaagATGGGAAGAACTCTTTGGTAATCATGAAGTGTGTAGATGTTGTGACGGTCGGTGCTCGGGGCGCTCGGTTAAAGGCAAGTTATTTTACTCCTGGCCAGAGCTCTGGTCATCTTGTACCAACATGGTCCGCAGTGCTCCTGTGCACTTCAGCCAGCAGAAGGACACATTTGAGGAGGTGGTGGAAGAAGTGGGTCCAAGTGAGGTCATTGAGAAAGCTGTCAAGCCTGGGGAGGAGGGTGCCGAGTGGGACAGCCTGCCTTTAGAGATGGAGGATGGATGGTGGGGTGAAGATGGGGACCTGAGATCTGATGAGCCAATAAGTGTTGCCAGCGAGGGATCTTGGTCTACCCCTGCAGAGGTGGTCATGGGTGTGAGAGGTGTGCCAGGCTCCCCAGCCCCAGGGGAAGCTGGATAGAAACTTGACTGAATGTAACCAGAACTCTTAAGGCAAGATGTTTTGCCCTTATCAGTAATTTATTACTGCTTATATAGTATGTGTGGTCTGGTAAATGTAATGCTACAATCCTGTTCAGGGTACACGTCAATGGGTATGTCAGTAGTTGAAGTATTGGTCCCATCACCTATTTCCTGTAGAGTCTAAATGGGCTCTGACCTTTTTGAATGGGGGGGGGGACCTCACTATGGATGTCAGTGAATCCCCCTTTCCTTCTCCAAGGATTCTGTGCTGCTGTATCTTTTGCTGTAATTCaaataaagtacaattttaAGGGAAGGATGGCCTGGACAGGCATGACTGAATGAAAGGGTACTGTGCCAATTTGTACACCAATACTAACAACGGTGTCTTTTCACCACCCACCCCACTCTTCATGGACATGGACATGGATCCTTGTcagaacacatttaaacaagtgCTGTAGAACTGGTGGTTCCTACCTCATTTTGCATTATGTCTTGATGCTTTactttgcaaaatatttaaatgtataggccaggaactttttgttttgtttattagttttcaTTGATAAAGTACAAACAATATGGACAAatgtgtacaaaaaaataagttactCCCTCCCTGAAATGGTTTTTACAATTAAGGCCACACAATTGTGggaaaggtttttaaaaataaaataactttccagattttaattattattatttaagtgccAGTCAAGAAATCAGTCATCAGGTTTTACTAATTTTTGGAATTAGTCTAAAACCTAGCCATTCCCTAAATGAAAAAGAGAACTAgagcacaattaaaaacacattgtggcATCATATTGTAGTACagtaaatgcaatatatatacattggtgTAGTTTGTTCTTTGGCAGAGGCAGGGTTAGTTCTGCTTTAGCTGTATTAGGAATTGTCAATagtcttccttttcttttcaatggCGCTGCTTCTCCATGATCTACAACACCATACCAGTTATCCTCTCCCATTCGCTTCAGTGTTCGTCAAATGCCATGtcattgtgtaataaaaactgtacagtCAAGGTGACAAACAGTGGAGCTCAATTCGGTACTGACGTGGTGCTCTAGGCAGACCCGTTGCTTGTCTTTGCTCAACCATGGTTGTCCAGCTATTGTTGTTCCTTTTGTTCTGGACATTCATGGAGAGATGTCtcatttgttttccccttccAAGATCTGTTAATACTTGCAAAGCTTTCAGAATAGAAAATGTGTACTAAAACAGAGCGGATGCGcaggactgactgactgatatgagtaattgtttttatcaaaataattacagtcGAAGCCCAAAAGAATTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011067 True 3124 mRNA 0.45 8 9435209 9439791

Neighbor

gene id symbol gene type direction distance location
AMCG00011066 NA coding upstream 5129 9425182 ~ 9430080 (+)
AMCG00011065 hpca,LOC105005722,LOC103394251,LOC101072338 coding upstream 26195 9391398 ~ 9409014 (+)
AMCG00011074 NA coding upstream 44108 9344531 ~ 9391101 (+)
AMCG00011064 NA coding upstream 90796 9326329 ~ 9344413 (+)
AMCG00011062 NA coding upstream 137558 9292633 ~ 9297651 (+)
AMCG00011063 NA coding downstream 19543 9459334 ~ 9467512 (+)
AMCG00011075 NA coding downstream 112013 9551804 ~ 9557387 (+)
AMCG00011081 hmgcl,LOC106610807,LOC106578367 coding downstream 126729 9566520 ~ 9574704 (+)
AMCG00011080 gale,LOC107583591,LOC107721820 coding downstream 135338 9575129 ~ 9581745 (+)
AMCG00011079 NA coding downstream 151281 9591072 ~ 9592187 (+)
G104115 NA non-coding upstream 82622 9352373 ~ 9352587 (+)
G104079 NA non-coding upstream 209031 9223185 ~ 9226178 (+)
G104062 NA non-coding upstream 275990 9158321 ~ 9159219 (+)
G104029 syf2,LOC107679146,LOC106610898 non-coding upstream 464439 8967878 ~ 8970770 (+)
G104042 LOC106579881 non-coding upstream 486386 8947773 ~ 8948823 (+)
G104147 NA non-coding downstream 34383 9474174 ~ 9475843 (+)
G104150 pabpc4,LOC107721216,LOC107659242 non-coding downstream 37776 9477567 ~ 9481674 (+)
G104204 NA non-coding downstream 253353 9693144 ~ 9746864 (+)
G104221 NA non-coding downstream 432862 9872653 ~ 9872890 (+)
G104255 NA non-coding downstream 1115938 10555729 ~ 10617196 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 882604 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 2331701 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 2514278 6892397 ~ 6920931 (+)
G103542 NA other upstream 2792581 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 3039725 6387036 ~ 6395484 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 90683 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 763826 10203617 ~ 10271863 (+)
G104273 NA other downstream 1378897 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 2204226 11644017 ~ 11651021 (+)
G104382 NA other downstream 2226407 11666198 ~ 11671340 (+)

Expression


Co-expression Network