G104204


Basic Information

Item Value
gene id G104204
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9693144 ~ 9746864 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130260
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacattatatacaagAGTGGCACATCATATTGTCAGTGGAAACACCATTAAAATGGGCTTCATTCCAGAGTTAATTTCTTCAGCAAGTTAACCTATTGTTAAATAAAGGTTCTATACTGTGAtttaaatgatgaaaacaactctctctggtgtataaaaaaaaaattggcatgGTAGAAACCGCACTATATTGCTTGGCAGACTAATTAAACTTACCAGCTGAAAATGCAGCTTGCTACCATTCTGTATTTGACATGTGAATTAACTACCAACGATGTTCACAATTCTGTATTGTTCACACTTTCTTTAGAAAAGGCATTcaaggaaatacattttgaaatacacatattttttttttcctttcaagtaAGTGAAAGTTTGATGATCCCATTTTCCTTGTTCCCCATTTAAGGGCAGATGACCAGTCATATGTAAAAGCAAGAATGTCAAATGTATCAACCCTGTTGTCTTTGCATTTtactgttaaaaatgaaaagcatatgaatcatcatttaaaatccctttctattttaattaaatgactaTGGTACTTTTGTATTCCTGTTTATACACCAAGTGCAAACAGAATAAATGAAGTATTGTGCtatagaaaaatctaaaaatggaTTAGGCCTACATGGTTATTAACATGCTTCATAAACTGTTTATATGGTAGCTCAAGTATTTCCAAAGCTGTCACCCTCTACCTCCCCTCCTTGATTAGAAATGGAGTGGTGaagcaagtttaaaatgtaatgaaaatgtatttctctcttAATGAGAACTTGGCTTCAATAATGAGATGCAGGTAGTTTGACACAATAGTGCTGGGTCTCTGATATTGCCTTTTCTGGCCTGTTACCAATTTTGTGGCAcgttgtttttgtaataattctGAAATAATTTTGCAAGTAATTTGCAACTTTCCAACAGATAAAATCAACCTTTAAATTtgggggaaggggggtgggggcatcTTTCTCAGAAGCTCTTTTCaggaataaaaactaaaataatacctTACTTTATAACCTTTTCTTCAGTGACCCAAAACGTAATTGGAATTGCACTCTTGGAAGTAAGCTAGGTATGGCTTAGTCCTGCTTAAGCATGTGAAAGCTGAGCAGTGAAAACCATTGCAGCAGGCCACAGGTATCGTAGCACCAGGCATGTCTACTAGCGGAAGTGTGGAGATCGACTGTCCTAAAGTTCTACCCATTAGAGGGGCGGTCTTGCCCTCCCTGCCATGATCCAGTCCCAGGGGCAACGTGGGGATGAGAAGAGGAGAAGTTCTCACATGAGCCTCATGATGGTGCTGGACAGGAAGTCTTCATAGTTCATGCGCACGTTCCCCGTCATGCCCGCGTCCTTCTCGCGGAACACCTGGGTCATGCTCTGCAGCTGCGTGCACACCTGGATGAAGCGGTCCAGCTGGATGTTCCCCTGGCTCCCCCTGGTGCCGAATCGAGAGACCAGTGTCTGCGTTAACTGAGGGCTGATGTTGTAGCCCATCTGGCCAAAGGCTGGAGAAAAAACACGCCAAAACAATTATTGTAAAAAGGGaatgacaaatacatacaaagacGATTCGTCCGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130260 True 1639 lncRNA 0.39 2 9693144 9746864

Neighbor

gene id symbol gene type direction distance location
AMCG00011079 NA coding upstream 100957 9591072 ~ 9592187 (+)
AMCG00011080 gale,LOC107583591,LOC107721820 coding upstream 111399 9575129 ~ 9581745 (+)
AMCG00011081 hmgcl,LOC106610807,LOC106578367 coding upstream 118440 9566520 ~ 9574704 (+)
AMCG00011075 NA coding upstream 135757 9551804 ~ 9557387 (+)
AMCG00011063 NA coding upstream 225632 9459334 ~ 9467512 (+)
AMCG00011087 csmd2,LOC106957799,LOC103363662 coding downstream 271698 10018562 ~ 10018933 (+)
AMCG00011088 csmd2,LOC107712626,LOC107698986,LOC107663732,LOC107757197 coding downstream 326858 10073722 ~ 10087704 (+)
AMCG00011090 csmd2 coding downstream 392597 10139461 ~ 10192241 (+)
AMCG00011091 trappc3,LOC107653823,LOC107564495 coding downstream 751613 10498477 ~ 10503466 (+)
AMCG00011095 NA coding downstream 854616 10601480 ~ 10603114 (+)
G104150 pabpc4,LOC107721216,LOC107659242 non-coding upstream 211470 9477567 ~ 9481674 (+)
G104147 NA non-coding upstream 217301 9474174 ~ 9475843 (+)
G104115 NA non-coding upstream 340557 9352373 ~ 9352587 (+)
G104079 NA non-coding upstream 466966 9223185 ~ 9226178 (+)
G104062 NA non-coding upstream 533925 9158321 ~ 9159219 (+)
G104221 NA non-coding downstream 125789 9872653 ~ 9872890 (+)
G104255 NA non-coding downstream 808865 10555729 ~ 10617196 (+)
G104271 NA non-coding downstream 976686 10723550 ~ 10723890 (+)
G104307 col9a2 non-coding downstream 1625690 11372554 ~ 11377085 (+)
G104310 NA non-coding downstream 1671802 11418666 ~ 11420066 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 143624 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 1140539 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 2589636 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 2772213 6892397 ~ 6920931 (+)
G103542 NA other upstream 3050516 6641983 ~ 6642628 (+)
AMCG00011089 csmd2 other downstream 456753 10203617 ~ 10271863 (+)
G104273 NA other downstream 1071824 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 1897153 11644017 ~ 11651021 (+)
G104382 NA other downstream 1919334 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 2061982 11808846 ~ 11810822 (+)

Expression


Co-expression Network