AMCG00011095


Basic Information

Item Value
gene id AMCG00011095
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 10601480 ~ 10603114 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011095
ATGCAGACACCGCAGAAACCCATTTGGCACTCTGGGAGCCGAGCCGAGCAGAGTGGCGGGGGGTGGCCTCCTCTCCCTGGCACGGCAGCTCCACTTCAGTTCAAGTTTACAGAGCCAGGTTACCCCATGACCCTCTTTAAAACTCTGTCCAGCAGCATCCTTGACTCTCGCTGTATCCCCTTCATCTCTTCCCTTGTTTTCATTGGTTGGTTCATTGCCGCTTTGTCAAACGGGAGGATCATGAATGTGCTACTGCTGCCCGTCTGTGTGCTGCTGACGCTGGGGAGCGTGTCAGCAGGGGGCTACCCTCCCATGCCCCAAATGAAGTACATGCAGCCTATGATGAAGGGACCGGTGGGCCCTCCTTTCAGAGAAGGCAAGGGCCAGCACATGGGTTCCTCGCTGGCACAGGCACAAGAGCTGGAGGACCAGAGGGGTGCAGACACAGCCCAAGTACTACCCTGGCTGAAGCTGCCGGGTGATGAGAATCGCACGGTGAATGACAGCGAGCTGCACATGCATTCCTGTCTGCGGGAGCGAGCTGTAACAACATCCACCCTGCAGAACGCTCTGTTTTCGGAAATGGGGGAGTTGTTTtccaaagcatttcaaaaattCTTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011095 True 624 mRNA 0.56 3 10601480 10603114

Neighbor

gene id symbol gene type direction distance location
AMCG00011091 trappc3,LOC107653823,LOC107564495 coding upstream 98014 10498477 ~ 10503466 (+)
AMCG00011090 csmd2 coding upstream 409239 10139461 ~ 10192241 (+)
AMCG00011088 csmd2,LOC107712626,LOC107698986,LOC107663732,LOC107757197 coding upstream 513776 10073722 ~ 10087704 (+)
AMCG00011087 csmd2,LOC106957799,LOC103363662 coding upstream 582547 10018562 ~ 10018933 (+)
AMCG00011082 NA coding upstream 869037 9723810 ~ 9732443 (+)
AMCG00011093 col8a2,LOC106570550,LOC107724334,LOC107565043 coding downstream 5843 10608957 ~ 10610882 (+)
AMCG00011094 tp4a2,ptp4a2,LOC107564493,LOC107653869,LOC107670276,LOC107710550,LOC105012508 coding downstream 37666 10640780 ~ 10651427 (+)
AMCG00011097 NA coding downstream 435942 11039056 ~ 11093828 (+)
AMCG00011096 NA coding downstream 490721 11093835 ~ 11124053 (+)
AMCG00011098 adgrb2 coding downstream 533602 11136716 ~ 11171971 (+)
G104221 NA non-coding upstream 728590 9872653 ~ 9872890 (+)
G104204 NA non-coding upstream 854616 9693144 ~ 9746864 (+)
G104150 pabpc4,LOC107721216,LOC107659242 non-coding upstream 1119806 9477567 ~ 9481674 (+)
G104147 NA non-coding upstream 1125637 9474174 ~ 9475843 (+)
G104115 NA non-coding upstream 1248893 9352373 ~ 9352587 (+)
G104271 NA non-coding downstream 120436 10723550 ~ 10723890 (+)
G104307 col9a2 non-coding downstream 769440 11372554 ~ 11377085 (+)
G104310 NA non-coding downstream 815552 11418666 ~ 11420066 (+)
G104326 NA non-coding downstream 929806 11532920 ~ 11593994 (+)
G104443 NA non-coding downstream 1241296 11844410 ~ 11844623 (+)
AMCG00011089 csmd2 other upstream 329617 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 1051960 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 2048875 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 3497972 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 3680549 6892397 ~ 6920931 (+)
G104273 NA other downstream 215574 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 1040903 11644017 ~ 11651021 (+)
G104382 NA other downstream 1063084 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 1205732 11808846 ~ 11810822 (+)
G104435 NA other downstream 1239015 11842129 ~ 11844089 (+)

Expression


Co-expression Network