AMCG00011098 (adgrb2)


Basic Information

Item Value
gene id AMCG00011098
gene name adgrb2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11136716 ~ 11171971 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011098
ATGGCTGTGACTCAAAGGTCAAAGCTACTGTGGGTCACTCAGGGTGCCCAGCTAGATCCCGAGGACGATGACGACGACGACCAGAAGGTGAAGACTCAAAGGCCGCGCTCTGCAGACCAGCCTGGGATCTTTCAGGCCCAGACAGGTGACCCGGCGGCGGAGGAGTGGTCGCAGTGGAGCGTGTGCTCGTTGACGTGCGGCCAGGGCTGGCAGGTGAGAACGCGCTCCTGCGTCTCCTCTCCCTACGGAACCCTGTGCAGCGGCCCGCTGAGGGAGACGCGGCTCTGCAACAACACCGCCACCTGCCCAGTGCACGGGCTGTGGGAGGAGTGGTCTCCATGGAGCTTGTGCTCGGTTACTTGCGGCAGAGGCTCGAGAACGAGATCGCGGATCTGCGTGGCTCCGCAGCATGGAGGGAAGGCCTGTGATGGGCCTGAGGTGCAATCAAAGCTCTGCAATATCGCATGCGGGGCACTAATGGCGGGCgcgcttgtgtgtgtgttttatgtgttgACAGTGGAGGGGCAGTGGCTGGACTGGGGGCCCTGGTCTAGGTGCTCTGTCACGTGCTCCAACGGCACTCAGCAGCGCACACGGAGGTGCAGCGTCTCCGTTCACGGCTGGGCCGAGTGCAAAGGGCCCCACGCCGAGACGCGGGACTGCTCAAAGTCCGAATGCGCAGCTGATGGGAAGTGGGGCGCGTGGAATCACTGGAGCCTCTGCTCGAAGACGTGCGATTCTGGCTGGCAGCGGCGGTTCCGAATGTGCCAGGGGACAGGCATCCAGGGCTACCCCTGCGACGGCTCGGGGGAGGAGGTGCGCACCTGCAACGAGAAGAAGTGCCCAGCCGCTCACGAAATGTGCAGAGACGAGTATCTTGTGTCCATGACCTGGAAGAGAGCTGCGGCAGGAGAGACTGTTTACAACAAGTGTCCATCAAACGCAACTGgaTCTGCTAGTCGTCGTTGTTTGCTGGACACTAATGGAGTTGCTTACTGGGGTCCTCCGAGCTTCGCCCGATGCGTCTCACTCGAGTACAGATATTTACATCTATCACTTCGAGAGCATCTTGCGAAGGGTCAGAGGATCCTGGCAGGGGAGGGCATGTCTCAGATCGTGAGGAGTCTCCTAGAGTTAATGTCCCGGAAAAGCTATTACAGCGGCGACCTGTTATTCTCGGTGGAGATTCTCCGAAATGTGACGGACACCTTCAAGCGAGCAACCTACATTCCAGCTCCCGACGACGTGCAGAAATTCTTCCAGGTAGTCAGTTACATGTTGGACATAGAGAACAGAGAGAAGTGGGATGACGCTCAGCAGGTCTACCCCGGTTCTGTGCACCTCATGCGTGTGGTTGAAGACTTCATCCATCTGGTGGGTGAAGCACAGAAAGCGTTCCAGAGCTCTCTGATCATCACCGAAAACCTGATGATCACCATCCAGCGAGAGCCCGTGTCCGCGGTCTCCAGTGACCTCAACTTTCCCATGAAGGGCCGGCGGGGGATGAAGGACTGGGCCAGGAACTCGGAGGACAAGCTGTTCATCCCCAAGGAGGTCTTCACACTGTCCTCCGAAGTGGGCCGCGTGCCGGCCGGAGTGAAGCTCATTGATTCGCTTAATGCATTTTCCATTGAGCTAAGAGAAAATAATCACTgcttaagaaagaaagaaagaaataatgtCGCCCACAAAGTGATAGCTGACATTCGCATTGACCCTTTCCCTGCTCTACTGAAGGAGCGCAGACGCTGGCTGTTGCACTGGCTGTTGCACTGGCTCACACACTGA

Function

symbol description
adgrb2 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and peripheral nervous system development. Predicted to act upstream of or within G protein-coupled receptor signaling pathway; cell surface receptor signaling pathway; and negative regulation of angiogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain; eye; heart; and pleuroperitoneal region. Orthologous to human ADGRB2 (adhesion G protein-coupled receptor B2).

NR:

description
PREDICTED: LOW QUALITY PROTEIN: adhesion G protein-coupled receptor B2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011098 True 1788 mRNA 0.58 14 11136716 11171971

Neighbor

gene id symbol gene type direction distance location
AMCG00011096 NA coding upstream 12663 11093835 ~ 11124053 (+)
AMCG00011097 NA coding upstream 42888 11039056 ~ 11093828 (+)
AMCG00011094 tp4a2,ptp4a2,LOC107564493,LOC107653869,LOC107670276,LOC107710550,LOC105012508 coding upstream 485289 10640780 ~ 10651427 (+)
AMCG00011093 col8a2,LOC106570550,LOC107724334,LOC107565043 coding upstream 525834 10608957 ~ 10610882 (+)
AMCG00011095 NA coding upstream 533602 10601480 ~ 10603114 (+)
AMCG00011099 adgrb2,LOC106931923,LOC107082735 coding downstream 47917 11219888 ~ 11252848 (+)
AMCG00011100 NA coding downstream 131093 11303064 ~ 11347011 (+)
AMCG00011101 NA coding downstream 179931 11351902 ~ 11369697 (+)
AMCG00011102 NA coding downstream 227878 11399849 ~ 11412952 (+)
AMCG00011106 LOC106588897 coding downstream 300828 11472799 ~ 11490031 (+)
G104271 NA non-coding upstream 412826 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 519520 10555729 ~ 10617196 (+)
G104221 NA non-coding upstream 1263826 9872653 ~ 9872890 (+)
G104204 NA non-coding upstream 1389852 9693144 ~ 9746864 (+)
G104150 pabpc4,LOC107721216,LOC107659242 non-coding upstream 1655042 9477567 ~ 9481674 (+)
G104307 col9a2 non-coding downstream 200583 11372554 ~ 11377085 (+)
G104310 NA non-coding downstream 246695 11418666 ~ 11420066 (+)
G104326 NA non-coding downstream 360949 11532920 ~ 11593994 (+)
G104443 NA non-coding downstream 672439 11844410 ~ 11844623 (+)
G104444 NA non-coding downstream 672715 11844686 ~ 11845805 (+)
G104273 NA other upstream 317293 10818688 ~ 10819423 (+)
AMCG00011089 csmd2 other upstream 864853 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 1587196 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 2584111 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 4033208 7071433 ~ 7103508 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 472046 11644017 ~ 11651021 (+)
G104382 NA other downstream 494227 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 636875 11808846 ~ 11810822 (+)
G104435 NA other downstream 670158 11842129 ~ 11844089 (+)
G104550 NA other downstream 894523 12066494 ~ 12067337 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000054_03558982_03663042 ADGRB2 coding CI01000054 null 3558982 ~ 3663042 (+)