Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00011102 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 11399849 ~ 11412952 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| id | description |
|---|---|
| K12486 | SMAP; stromal membrane-associated protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00011102 | True | 1260 | mRNA | 0.60 | 10 | 11399849 | 11412952 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00011101 | NA | coding | upstream | 30152 | 11351902 ~ 11369697 (+) |
| AMCG00011100 | NA | coding | upstream | 52838 | 11303064 ~ 11347011 (+) |
| AMCG00011099 | adgrb2,LOC106931923,LOC107082735 | coding | upstream | 147001 | 11219888 ~ 11252848 (+) |
| AMCG00011098 | adgrb2 | coding | upstream | 227878 | 11136716 ~ 11171971 (+) |
| AMCG00011096 | NA | coding | upstream | 275796 | 11093835 ~ 11124053 (+) |
| AMCG00011106 | LOC106588897 | coding | downstream | 59847 | 11472799 ~ 11490031 (+) |
| AMCG00011109 | kcnq4 | coding | downstream | 86613 | 11499565 ~ 11500270 (+) |
| AMCG00011107 | NA | coding | downstream | 114258 | 11527210 ~ 11530729 (+) |
| AMCG00011105 | kcnq4 | coding | downstream | 130036 | 11542988 ~ 11552978 (+) |
| AMCG00011108 | NA | coding | downstream | 161588 | 11574540 ~ 11587206 (+) |
| G104307 | col9a2 | non-coding | upstream | 22764 | 11372554 ~ 11377085 (+) |
| G104271 | NA | non-coding | upstream | 675959 | 10723550 ~ 10723890 (+) |
| G104255 | NA | non-coding | upstream | 782653 | 10555729 ~ 10617196 (+) |
| G104221 | NA | non-coding | upstream | 1526959 | 9872653 ~ 9872890 (+) |
| G104204 | NA | non-coding | upstream | 1652985 | 9693144 ~ 9746864 (+) |
| G104310 | NA | non-coding | downstream | 5714 | 11418666 ~ 11420066 (+) |
| G104326 | NA | non-coding | downstream | 119968 | 11532920 ~ 11593994 (+) |
| G104443 | NA | non-coding | downstream | 431458 | 11844410 ~ 11844623 (+) |
| G104444 | NA | non-coding | downstream | 431734 | 11844686 ~ 11845805 (+) |
| G104445 | NA | non-coding | downstream | 433036 | 11845988 ~ 11846253 (+) |
| G104273 | NA | other | upstream | 580426 | 10818688 ~ 10819423 (+) |
| AMCG00011089 | csmd2 | other | upstream | 1127986 | 10203617 ~ 10271863 (+) |
| AMCG00011076 | zbtb8b,LOC107724281,LOC107584246 | other | upstream | 1850329 | 9530474 ~ 9549520 (+) |
| G103939 | yars,LOC107724337,LOC107687080,LOC107709269 | other | upstream | 2847244 | 8548363 ~ 8552605 (+) |
| AMCG00010994 | NA | other | upstream | 4296341 | 7071433 ~ 7103508 (+) |
| AMCG00011110 | zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 | other | downstream | 231065 | 11644017 ~ 11651021 (+) |
| G104382 | NA | other | downstream | 253246 | 11666198 ~ 11671340 (+) |
| AMCG00011115 | NA | other | downstream | 395894 | 11808846 ~ 11810822 (+) |
| G104435 | NA | other | downstream | 429177 | 11842129 ~ 11844089 (+) |
| G104550 | NA | other | downstream | 653542 | 12066494 ~ 12067337 (+) |
