Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00011107 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 11527210 ~ 11530729 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0051049 | regulation of transport | biological_process |
| GO:0006813 | potassium ion transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005267 | potassium channel activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00011107 | True | 534 | mRNA | 0.61 | 5 | 11527210 | 11530729 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00011109 | kcnq4 | coding | upstream | 26940 | 11499565 ~ 11500270 (+) |
| AMCG00011106 | LOC106588897 | coding | upstream | 37179 | 11472799 ~ 11490031 (+) |
| AMCG00011102 | NA | coding | upstream | 114258 | 11399849 ~ 11412952 (+) |
| AMCG00011101 | NA | coding | upstream | 157513 | 11351902 ~ 11369697 (+) |
| AMCG00011100 | NA | coding | upstream | 180199 | 11303064 ~ 11347011 (+) |
| AMCG00011105 | kcnq4 | coding | downstream | 12259 | 11542988 ~ 11552978 (+) |
| AMCG00011108 | NA | coding | downstream | 43811 | 11574540 ~ 11587206 (+) |
| AMCG00011111 | NA | coding | downstream | 107273 | 11638002 ~ 11642227 (+) |
| AMCG00011116 | NA | coding | downstream | 303115 | 11833844 ~ 11839029 (+) |
| AMCG00011122 | NA | coding | downstream | 412870 | 11943599 ~ 11946001 (+) |
| G104310 | NA | non-coding | upstream | 107144 | 11418666 ~ 11420066 (+) |
| G104307 | col9a2 | non-coding | upstream | 150125 | 11372554 ~ 11377085 (+) |
| G104271 | NA | non-coding | upstream | 803320 | 10723550 ~ 10723890 (+) |
| G104255 | NA | non-coding | upstream | 910014 | 10555729 ~ 10617196 (+) |
| G104221 | NA | non-coding | upstream | 1654320 | 9872653 ~ 9872890 (+) |
| G104326 | NA | non-coding | downstream | 2191 | 11532920 ~ 11593994 (+) |
| G104443 | NA | non-coding | downstream | 313681 | 11844410 ~ 11844623 (+) |
| G104444 | NA | non-coding | downstream | 313957 | 11844686 ~ 11845805 (+) |
| G104445 | NA | non-coding | downstream | 315259 | 11845988 ~ 11846253 (+) |
| G104479 | NA | non-coding | downstream | 383765 | 11914494 ~ 11917031 (+) |
| G104273 | NA | other | upstream | 707787 | 10818688 ~ 10819423 (+) |
| AMCG00011089 | csmd2 | other | upstream | 1255347 | 10203617 ~ 10271863 (+) |
| AMCG00011076 | zbtb8b,LOC107724281,LOC107584246 | other | upstream | 1977690 | 9530474 ~ 9549520 (+) |
| G103939 | yars,LOC107724337,LOC107687080,LOC107709269 | other | upstream | 2974605 | 8548363 ~ 8552605 (+) |
| AMCG00010994 | NA | other | upstream | 4423702 | 7071433 ~ 7103508 (+) |
| AMCG00011110 | zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 | other | downstream | 113288 | 11644017 ~ 11651021 (+) |
| G104382 | NA | other | downstream | 135469 | 11666198 ~ 11671340 (+) |
| AMCG00011115 | NA | other | downstream | 278117 | 11808846 ~ 11810822 (+) |
| G104435 | NA | other | downstream | 311400 | 11842129 ~ 11844089 (+) |
| G104550 | NA | other | downstream | 535765 | 12066494 ~ 12067337 (+) |
