G104310


Basic Information

Item Value
gene id G104310
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11418666 ~ 11420066 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130401
gagagagagagagagagagagagagagagagagagagagagagagagaggctgaaaTTTATCATTCTGTTTTAGTCAGAGTGCCTGCAGGGAAACACATAGAAGTTAAATGGCTGTTGTGAACATTAGTGTCACTCTCCTgcagcacactgcactgtgtgcCTGTATCTGTACATTGGAACAGAAGGCAGATTTAGTCACACATGACatctgtccagtccagtctctctctcccactgtgGACAGACAGGGTGACATTTCTCTGGTGTGGGCCATGCAGTGCGGGCCAGAGAGGACGTATATGTGCTGTCCCTCTGTCTTTCTGGTGGTCTGataacaccccccccacacagcaCCTCCCTTACAGACAGCACCCACACCTGCTATACACCTCTTTTTCAGGAAACTCATTCATTGTTTGGttgtccttgtttttatttgtaggcATTACAGGGGGGCTGCTTGATTTTATCCCCCCTAAAACTGATGGAcccactttattattattattattattattattattattattattataagaattGTTGCTGTCAAACGTTGCATGATGAgattgtgtaattttttttttataatttctgtCTCAAATTACTTATGAAGCCTTTCTTtgtacttaaaattaaaaaaaaacataaagaaataattaactatatacatatagtagagggggtggggaggcaTTGAGAAGCAGATTAAGTACAGTACCCAAGCTTTGACCTGCTGGTTAATTTGCAAATTACAAGTaaatcaaaaccaaatcaaaacaaaatgcttaaaaaaaaatctgccacCAGTGCAGGGATTAGAATGAACACTTAGCACGTGTTAGAAAAAGGTTGGGATTTGATCCAAGTCTCGGCCTCTGTGAGAACTGTGGTCCAGTGTTTGGGCTGCTTTCCCAGGCTGTGACCATAAGCAGTTCGTGCAGATATTGGCAAAGTCCTGGAGTGGACCATTGCACCCAGTGGCTCGGTCTGTGTCCCATTGCCAGAGGGTCTCAAAACTGCGCTCTCCTTTTCCATTTGGATGAGAGGAGATCTCGGTCcgtttcatttttgtatttctaagtTAAAgaatatttgcaaattaaatgaatgtacacTTTTATTGACagaatgatttataaattatattgctTTCACTTGTGGTTATTGAGTCTCCagttgcttttttccttttttttaaactgctaaTGCTTGTCACAACAATTTTTGTGGATAAATTGTACTGTGTACCTTCATTTTCTATggcttaaatattttttttcttcttttccctttttttaatatcCTGTCTGTGTAATATAAGcatacatgaaaatatatatataaaaatgtaatataaaagcCTTGTTTCGTGTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130401 True 1380 lncRNA 0.39 2 11418666 11420066

Neighbor

gene id symbol gene type direction distance location
AMCG00011102 NA coding upstream 5714 11399849 ~ 11412952 (+)
AMCG00011101 NA coding upstream 48969 11351902 ~ 11369697 (+)
AMCG00011100 NA coding upstream 71655 11303064 ~ 11347011 (+)
AMCG00011099 adgrb2,LOC106931923,LOC107082735 coding upstream 165818 11219888 ~ 11252848 (+)
AMCG00011098 adgrb2 coding upstream 246695 11136716 ~ 11171971 (+)
AMCG00011106 LOC106588897 coding downstream 52733 11472799 ~ 11490031 (+)
AMCG00011109 kcnq4 coding downstream 79499 11499565 ~ 11500270 (+)
AMCG00011107 NA coding downstream 107144 11527210 ~ 11530729 (+)
AMCG00011105 kcnq4 coding downstream 122922 11542988 ~ 11552978 (+)
AMCG00011108 NA coding downstream 154474 11574540 ~ 11587206 (+)
G104307 col9a2 non-coding upstream 41581 11372554 ~ 11377085 (+)
G104271 NA non-coding upstream 694776 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 801470 10555729 ~ 10617196 (+)
G104221 NA non-coding upstream 1545776 9872653 ~ 9872890 (+)
G104204 NA non-coding upstream 1671802 9693144 ~ 9746864 (+)
G104326 NA non-coding downstream 112854 11532920 ~ 11593994 (+)
G104443 NA non-coding downstream 424344 11844410 ~ 11844623 (+)
G104444 NA non-coding downstream 424620 11844686 ~ 11845805 (+)
G104445 NA non-coding downstream 425922 11845988 ~ 11846253 (+)
G104479 NA non-coding downstream 494428 11914494 ~ 11917031 (+)
G104273 NA other upstream 599243 10818688 ~ 10819423 (+)
AMCG00011089 csmd2 other upstream 1146803 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 1869146 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 2866061 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 4315158 7071433 ~ 7103508 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 223951 11644017 ~ 11651021 (+)
G104382 NA other downstream 246132 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 388780 11808846 ~ 11810822 (+)
G104435 NA other downstream 422063 11842129 ~ 11844089 (+)
G104550 NA other downstream 646428 12066494 ~ 12067337 (+)

Expression


Co-expression Network