AMCG00011099 (adgrb2,LOC106931923,LOC107082735)


Basic Information

Item Value
gene id AMCG00011099
gene name adgrb2,LOC106931923,LOC107082735
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11219888 ~ 11252848 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011099
ATGGGTCCATCCGGCGTGCCATCAGTCCCCCTCATGATCGGCTGTGCTATATCCTGCATGGCTCTGCTCACCCTGTTGGCCATTTACGCTGCCTTCTGGAGGTATATAAGGTCGGAGAGATCCATCATCCTGCTCAATTTCTGCCTCTCCATCCTGGCCTCCAACATCCTCATTTTGGGTCTGTGCACAATGACTGCTGCCTTCCTGCATTTCTTCTTCCTGTCCTCCTTCTGCTGGGTGCTGACGGAGGCATGGCAGTCCTACCTGGCTGTGATTGGCAAGATCAGGACTCGCCTCATCCGCAAGCGCTTTCTTTGCCTGGGCTGGGgtcTGCCAGCATTAGTGGTGGCTGTTTCTGTGGGCTTCACTCGAGCCAGAGGCTATGGCACGGCGAGCTACTGCTGGCTGTCTCTGGAGGGGGGCTTGCTGTACGCCTTCGTGGGCCCGGCAGCAGTCATTGTGCTGGTGAATATGTTGATTGGCATCGTGGTGTTCAATAAACTGATGTCCAGGGATGGGATTTCAGATAAGTCTAAAAAGCAGAGAGCCGGTCAGCCGAATGAGCCCCGTAGCAGACTGCTTCTCAAATGCTCCAAGTGTGGGGTGATCTCGAGCACAGCTCTGTCCACCTCCACCGCCAGCAACGCCATGGCGTCCTTGTGGAGCTCATGCGTCGTGCTCCCGCTGCTGGCCCTCACGTGGATGTCTGCCGTCCTGGCCATGACAGACCGCCGCTCCATCCTCTTCCAGGTGCTCTTCGCCGTCTTTGACTCGGTCCAGGGCTTCGTCATCATCACTGTCCACTGCGCGCTACGGAGAGAGGTCCAGGACGTGGTGCGCTGCCGGATGGGGATCTGCAAAGACGACAGTGAAACCTCCCCAGACTCCTGCAAAAACGGACAGACAGACTTTGAAAAAGATGTGGACCTGGCTTGCCAGACAGtcatCTTTAAGGAGGTGAACACATGCAACCCAGCCACCATTACAGGAACGCTGTCCCGCATCTCCCTGGACGACGAGGATGACCCCAAGCTCAACACCAACCTGGAGGGCATGAACTTCACCAGCCTGCCGGGCAACATCCCCCCTCCCAACCTCCTGGTGCAGCCCACGAGCGAGGGTGACTACATGGTACTGCCCAGGAGGACCGTCAGCCTCAAACCAGAGGGCAAGCCTCTCAACATCGCCGTGGATGACGTGCCCTTCCCgccaccccccccgcccctcacCCTGCACCCGGTAGAAACGGAGACCTACCCCAACTTCGTCTCTGTGGACCACATCAACATGAACCTGAACCAGTCCTACGGCACCCTCAAGCACCCCCACGGGCTGCAGTTCAAGCAGCACCCCTCCGTGCGGCAGATCCTGGCCTCCGAGCTGGGCGACAAGAGCCGGACCATGCCACGCAACATGGGCGGCTCCACTCTGTCAGTGGGCTCTCTGGAAAGGAAAAGAGTACGGTATTCTGACTTGGACTTTGAGGTAAGACACGACAGAATGATCCCGTCTTTTGAGTCTAAAGTGATGCACACTCGCAAGCGCCATTCGGAGCTGTACCACGAACTCAACCACAAGTTTCACACAATTGACAGGTACAGGGAACCATCTACATCCACTTTCAAGGATAAGTCCACCCCTGATGACCAGCAGTCCTGGGACAGTTTCAAAGTGATGACCCTTAATACGTCACCATCAGAGCAGAAAGACAAACTGGAACTACACAGCAAAACCTGGGACACGACttctgcacacacactggacacgtCGGAGGGAGACTTTCAAACTGAAGtttgagaataaaacaaacaaacaaaaaaaaaaaacgtacagctttgaattaaagaaaaaataaaaactcagatAAATGGagaacaatcacacacacatttttacttCAGACAGGACGTACAGAACAGAAGAGactgcattatatattttcacactGACACTTTAACACCAGGGGAGGGAGGGCAGGATgggtgagggaaaaaaaagttttctgaaATGTCTCGATTTTCTTTGGAAGGATTCCCTTCACACGTTTGAAAAAGAGGAGTATTTCTGCACCGTTCTTTTTTAGAAAATTTTCTCACTGATGTTGCACACGTTCAAGcgatttaggtttttttttgtttttttgtttttcctttttattcctAATGGATGATACAAGCTTtctctttgaaaaacaaagcagaattcattaataaacaaaacccgTCTTCGGCTCTTTGCAACACCAACAATACTGTTCActttcattgttcttttctcctttatttattttttcttcattttgtgtttttgaacgTTTTGACTACACCACACTCTTCATggtccatttgttttttgaaagtccCTTTGGTTGATTTGGAATCACATCTATTgccatgttatatatatatatatata

Function

symbol description
adgrb2 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and peripheral nervous system development. Predicted to act upstream of or within G protein-coupled receptor signaling pathway; cell surface receptor signaling pathway; and negative regulation of angiogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain; eye; heart; and pleuroperitoneal region. Orthologous to human ADGRB2 (adhesion G protein-coupled receptor B2).

NR:

description
PREDICTED: adhesion G protein-coupled receptor B2 isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011099 True 2415 mRNA 0.50 15 11219888 11252848

Neighbor

gene id symbol gene type direction distance location
AMCG00011098 adgrb2 coding upstream 47917 11136716 ~ 11171971 (+)
AMCG00011096 NA coding upstream 95835 11093835 ~ 11124053 (+)
AMCG00011097 NA coding upstream 126060 11039056 ~ 11093828 (+)
AMCG00011094 tp4a2,ptp4a2,LOC107564493,LOC107653869,LOC107670276,LOC107710550,LOC105012508 coding upstream 568461 10640780 ~ 10651427 (+)
AMCG00011093 col8a2,LOC106570550,LOC107724334,LOC107565043 coding upstream 609006 10608957 ~ 10610882 (+)
AMCG00011100 NA coding downstream 50216 11303064 ~ 11347011 (+)
AMCG00011101 NA coding downstream 99054 11351902 ~ 11369697 (+)
AMCG00011102 NA coding downstream 147001 11399849 ~ 11412952 (+)
AMCG00011106 LOC106588897 coding downstream 219951 11472799 ~ 11490031 (+)
AMCG00011109 kcnq4 coding downstream 246717 11499565 ~ 11500270 (+)
G104271 NA non-coding upstream 495998 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 602692 10555729 ~ 10617196 (+)
G104221 NA non-coding upstream 1346998 9872653 ~ 9872890 (+)
G104204 NA non-coding upstream 1473024 9693144 ~ 9746864 (+)
G104150 pabpc4,LOC107721216,LOC107659242 non-coding upstream 1738214 9477567 ~ 9481674 (+)
G104307 col9a2 non-coding downstream 119706 11372554 ~ 11377085 (+)
G104310 NA non-coding downstream 165818 11418666 ~ 11420066 (+)
G104326 NA non-coding downstream 280072 11532920 ~ 11593994 (+)
G104443 NA non-coding downstream 591562 11844410 ~ 11844623 (+)
G104444 NA non-coding downstream 591838 11844686 ~ 11845805 (+)
G104273 NA other upstream 400465 10818688 ~ 10819423 (+)
AMCG00011089 csmd2 other upstream 948025 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 1670368 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 2667283 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 4116380 7071433 ~ 7103508 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 391169 11644017 ~ 11651021 (+)
G104382 NA other downstream 413350 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 555998 11808846 ~ 11810822 (+)
G104435 NA other downstream 589281 11842129 ~ 11844089 (+)
G104550 NA other downstream 813646 12066494 ~ 12067337 (+)

Expression


Co-expression Network