AMCG00011444 (prelid1)


Basic Information

Item Value
gene id AMCG00011444
gene name prelid1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 25044205 ~ 25047214 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011444
ATCTTGCAGGGAATCTCCGTTTGAAAGGACCAATCTGCCGAGCCCGGCTGTGTCCGGATTGAGGAGCCATGGTGAAGTACTTCCTGGGCTTCAGTGTCCTTAAGGGCTCGTGGGACCAAGTCTTCAGCGCGTTCTGGCAACGCTATCCAAACCCCTACAGTAAACACGTCCTGACGGAGGACATCATCTTCCGGGAGGTGACTTCGGACAACCGGCTCGTTTCCAGGCGACTCCTGACCAAGACAAACCGGGCGCCACGCTGGGCTGAGAAGTACCTGCCCTCCAACATGGCGCGCTCGGCCTACATCATCGAGGACTCCATTGTGGACCCCCAGAGGAGGACCCTGACCACCTTCACCTGGAACATCAGCCACGCGCGTCTCATGACAGTGGAGGAGCGCTGTGTGTATGGAGTGAATCATGAAAACGCCACCTGGACCGAGATAAAAAGAGAGGCCTGGATCTCATCCAACTTGTATGGTCTGTCCAGAGCTCTTCAGGAATTTGGCCTTGCAAGGTTTAAGACCAGTGTTTCAAAAACCATGAAGGGGTTCGAGTTTGTCTTAGCCAAAATGCAAGGCGAAACTCCCTCAAGGACATTAGTGGAGACGGCCAAAGAAGCGACCGAGAAAGCCAAGGAGACAGCTTTAGCTGCCAAAGAGAAGGCAAAAGACTTGGCCTCCCAAGCTCAGAAGAAGCAGTATGTCTGAGCCGTTGACAccggaaagaaaaataactttgttCGGACACTGACGACTTCAACTTTCTTGTCGTCTCTGGCGTTTCCTCTGCTTCTCATTCCCAAAGCTCAACCCTAACCCTCAACTCCTTGTTAGGAACGAGTTTTCTTCCCAAGTAAAAACAAAGATGACAAGATTCCTTTAGATTGTTAGAAAGCATTggaaatttacttttttatgattgctatttttttttctcctcaccTAGAAAAACAAGTCTTTGAAGAGCTGCTTTTGCcgcatttttaaataaagtgccCCAAAGAATAGGGAGTCATAAAATGCTAACATTAGCTTTAGTACAGCTGCATTCAAAGTCCTGGAATTAATCCTGTTACCGCTTTCTTTTGgtctacatatatatttatattttacaaagctgTAAATTCATTGCTACTTCAAATTGAAGTTGTTTTACTGGTGTGTGACCTTGGGTTCACCTGACCAGCCGTCACTCACTCTGTGATACTTTACTGTGCACCCTGAGCGCTCCCAGGGGTGACTTCTGAACACGCCTTCTGTCAGCGACGTCTTCTCAGGATTGAATTGCGGTTCCTGGGTGTGTCTGGAGTAAAAGTCAAAGCGATTTGTAAAGGAAGAGGTTGGTCAAATTAAAAGCTACAGTGTGGGGAAGAAAAAGCCAGCCGAAATGAAATTGAATCAtgtgcataattaaaaataaataaatcttaaaatgtg

Function

symbol description
prelid1 Contributes to phosphatidic acid transfer activity. Involved in several processes, including negative regulation of mitochondrial membrane potential; positive regulation of cellular metabolic process; and regulation of apoptotic process. Located in mitochondrial intermembrane space and nucleoplasm. Part of protein-containing complex.

NR:

description
PREDICTED: PRELI domain-containing protein 1, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011444 True 1439 mRNA 0.46 5 25044205 25047214

Neighbor

gene id symbol gene type direction distance location
AMCG00011443 cltb coding upstream 29336 25003664 ~ 25014869 (+)
AMCG00011440 rnf44 coding upstream 57482 24971547 ~ 24986723 (+)
AMCG00011441 NA coding upstream 127265 24915075 ~ 24916940 (+)
AMCG00011438 NA coding upstream 157444 24881356 ~ 24886761 (+)
AMCG00011439 NA coding upstream 220176 24817579 ~ 24824029 (+)
AMCG00011450 NA coding downstream 24523 25071737 ~ 25093488 (+)
AMCG00011451 ddx41 coding downstream 47315 25094529 ~ 25105105 (+)
AMCG00011449 NA coding downstream 59114 25106328 ~ 25114493 (+)
AMCG00011453 NA coding downstream 122286 25169500 ~ 25170670 (+)
AMCG00011452 NA coding downstream 123494 25170708 ~ 25171196 (+)
G106874 NA non-coding upstream 52968 24986838 ~ 24991237 (+)
G106863 NA non-coding upstream 100527 24919851 ~ 24943678 (+)
G106871 NA non-coding upstream 103382 24939022 ~ 24940823 (+)
G106742 NA non-coding upstream 1073022 23941012 ~ 23971183 (+)
G106718 NA non-coding upstream 1210905 23829289 ~ 23833300 (+)
G106906 NA non-coding downstream 310 25047524 ~ 25049147 (+)
G106946 NA non-coding downstream 290338 25337552 ~ 25337767 (+)
G106947 NA non-coding downstream 324265 25371479 ~ 25371745 (+)
G106961 NA non-coding downstream 618910 25666124 ~ 25667782 (+)
G106966 NA non-coding downstream 627202 25674416 ~ 25677419 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other upstream 1199294 23835819 ~ 23844911 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other upstream 1291203 23748674 ~ 23753002 (+)
G106618 NA other upstream 1687646 23356062 ~ 23356559 (+)
G106613 NA other upstream 1702440 23341308 ~ 23341765 (+)
G106242 NA other upstream 4676982 20361208 ~ 20367223 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 560772 25607986 ~ 25662179 (+)
AMCG00011476 NA other downstream 1308953 26356167 ~ 26360775 (+)
G107202 NA other downstream 1723224 26770438 ~ 26771214 (+)
AMCG00011488 NA other downstream 1770838 26818052 ~ 26842792 (+)
G107394 NA other downstream 2664992 27712206 ~ 27727867 (+)

Expression


Co-expression Network