G106718


Basic Information

Item Value
gene id G106718
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 23829289 ~ 23833300 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU133503
agttaGCAGCAGCACATACAGGATTTGACTGGATTTCACAGTGTTTACACAGTTCCTCCCATCTATTCACCAGATGTTAGTGACAAACAACACGTGGCAGCTGTAATAACAATGGtattaacatgaaaaacatgaaatccaaatgttataattaaaaaatatgaatataaaagtgGCCTGTAATATGAAATGTGAACATTGTAAACTTCTTAGCAAGCCCCCGGCTACAAATGCTGTTTGAATCTGAAAGTGAAGAACCCAAGAGGAAATGAGACAGCTAAGCTACTCAAGAAAACATCCCAGAATAAGTGTAATTCGATAGCTAGTGACGTCAATTGAAGCGAATGTGCAGAGCTGCGGTTAAAGGGGCTTGAACTTGTAACACTACAGCTCTTAAGTAGCCCTTTCTTAAATTAGAACCATTTCAGAGAAGCTGATCCTCCACATTGGCTCAGCTGTGTTTTGAGGTAGACGGCACAAACAACGGATTTTCCCTCAAAGGAACCTCAAGTCTTCCTTCAACTTGGCAAACAAAGAGGGTTATCTATTCTTCAGCACTGTATGTTCTTACACATATCCTGGGTTCTCTTATAAGACCACATTCTGTCATCTGTCATAAAAAATTATGAGCAAGCCATGAGTAACACTTTCTGAATGCACTTACTGCAACGTTCGTCATCTGATTGACGCTGTGTAGCTGAAAGTCCAAGGCAAAGTGAAAGACACACCTTATATCACCAAACTAAATGCATCAGGCTTCCCTCTATGTGAACTACATGACATGTGCTACTGTACAGAGGCTAAAAGGAGGAACTTGGATAGGTACACAAGCTATTAAATCCTTTGTGAAAAGTAGCATTTTGTTCTTCCAAAATCTTTACTGATGATCGTTTAcaacattcatatttacatggtaaatgctttcattttaaatataagttGCTTCATAGAAGGACAATATGTCTATACAGTGGAATGCTGgcaataaaatactatttgaataaagcaatttaaaaatggaaatgctcATTTATGAAGCATGTTCCGGGAAGCaataagtttgtttttcaatagcATGTTTCTTCCATTTCCACTCACGTCTTCATACATGCTTCTCGTTCTACATTacataacttttaaataaaggaacaaATTAAAGTATCACACCCTAGTTACACAACCTTATCAGCAGGtgttaactaaataaaataaaaatgcaataacgGGTTTCAATGTGGGCTTTCCCGTGGAAACACAAGGTGGTCATACTGTGGCTGCTGTGATTGCCTATGGATTTTGACAATAAAAGATTAGGTGAACTTTAGGACGTGATTCTGCTAGGATGacaggctgggattaaatcaaaactttcagcCACACACTATTAGAAAACTACAATCCTGCACTCAGAGGCAGCTTGATTTTTTGTAAGATGCTGTTTTCCTCTTCACACGAATGGAaatgctatgatgtacaggctTGCGGTTTTGCTATAAGAGGGTGGGTCAACGATTTGATTTGATCTTGTTCCTAGCAAGGGTAAGCCAATACCTAACATAACAGGATACAACAAACAAGTATTGGATTGCcaataaaaagcacacaaaaaaaagcatcAGCAAAGTAACATGCAAGTTCTTGTCTTCTTGCTGGGCATACAACAAAAACTTCTGAATCTCTCTTCCATACATTGTTTTTGAAGACACAACAAAGAGGGACACTTAGTTTTATATAATGGTTATCACAGCTCTAAATTTTTAACAAAGAATACGCACCTCTTTACAGTAAAAGTTGATGAGATGCATCTATTCTATTCAACTattcatgtctatttttgaactTCAGCGCCAATGACAATATCATACCGCTTTAACAACATCACAAGGGCCGGTGATCGGAAGGAACATGTTTACTGTTCACTACAAGATACACactcacttcctgtttacagAGCTAATCAGGAACATGCCCGAGTACAGTGTTTACATTGGCttgtattttcttcttgcaCTGTTAAATTTAGAGAGCAACCACAGTCAGGACATgtaatcttgtttttctttgccatTACCTTATTCGTACAAATATTTGCAACATTTTCTGGTGCCAAAAGTTTTGTATGCATGCAGCTGATGAGAACTTATTTTATGTCAATAACAACATTCTATTTTGCCAGGAGCGAAAGAAAGCTTAAATGTGGTTTTGTTAAAGGCTGCATAATTGAGAACAGAGATACAAAAGCATAGAAACAAAAcccaaatatataaatcaacctatgctatacattttaattctattGACACATACTTGATTCTGGTCAACAACTTGTCCACTAGTAGGAAGTATTCAGAATGTAATTATAACATTAGCATATGcgttttcatttaaacatgtgGATGTATGACGTTaacttttgtattaattttgctAGAGGTTCTTTGGAATGaggtattataataaaaaagcaacacatgATGTACAAAACCATGCTTAGTCCTCGGTTGGTCCACTGACTCACTCAGAGTAGGGACatttatgtacatgtatttatcgTAAGCACTTTAATactgttaaaatgttatttagctttattaatattaatacattttcgtGTTCCTTACTTGACAGTGTAAATGATAAGTTACTGATTTGATTCTGGATGGACATATATCCCATATATCAGTGTGCTCCAGTACAATCTCTCACACATGATTCGTTTCGAGTTTTCCAATTAGAAATAAACTGTTCTTTCTGCCAGCAAGCCCTATTCACGGTCTTCCTTTCTTTACAGAAAACACCAGAATATCAAACACTTGTTTCTGAAGTGAGGCTGGAATTGAGGATCAGTTGAAATGTGGAACTTGGAAGCAAGCAATATCCAATTGGTCAGCATAGTCTCCTTCAAGGAATGTGTCATTGCGTCCATAACTGAAGGACTACAGTCCTGTTTCTCCTTTCAAACCCTGTTCGTACAAGCCGTAGCTTTCTTCTGTTCCATTCATGTGGCCAGGAAAAGCACAGAAAATTGTCCATTCTAGTAACTGTGTCAGGCATTCTCTATCCTGCTTGGGTTAGTCCGTACCCGGTACATGATGACAGACACTACTGGACACGCCAGTAGGGACATCATGAAGATAACTGTGGCAAGAATGACCAGCACAATGGCCCAGATTTCAAGGATGTGTTTTGGGAGTTCAATTTCTGTTTGTTCCATCTCAATAGCTCCTTGGGTCTTCACATTCAAGTgccctttaaaaacatgaaataacaaAGGATTAATTAGTGATCCATAATCTGTTcacttcaataaaaataaaata

Function

NR:

description
PREDICTED: membrane-associated phosphatidylinositol transfer protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133503 True 3320 lncRNA 0.37 2 23829289 23833300

Neighbor

gene id symbol gene type direction distance location
AMCG00011426 NA coding upstream 15573 23786963 ~ 23813716 (+)
AMCG00011425 NA coding upstream 53781 23760289 ~ 23775508 (+)
AMCG00011420 NA coding upstream 152013 23663024 ~ 23677276 (+)
AMCG00011418 NA coding upstream 171847 23656670 ~ 23657442 (+)
AMCG00011419 NA coding upstream 205989 23622780 ~ 23623300 (+)
AMCG00011429 NA coding downstream 76400 23909700 ~ 23938038 (+)
AMCG00011434 ctnna1 coding downstream 315657 24148957 ~ 24174504 (+)
AMCG00011435 ctnna1,LOC107594945,LOC107750356 coding downstream 376690 24209990 ~ 24242241 (+)
AMCG00011437 NA coding downstream 960072 24793372 ~ 24808824 (+)
AMCG00011439 NA coding downstream 984279 24817579 ~ 24824029 (+)
G106640 fat2 non-coding upstream 288561 23539365 ~ 23540728 (+)
G106631 NA non-coding upstream 307358 23382282 ~ 23521931 (+)
G106619 NA non-coding upstream 468275 23356734 ~ 23361014 (+)
G106609 NA non-coding upstream 473646 23353628 ~ 23355643 (+)
G106607 NA non-coding upstream 621812 23207246 ~ 23207477 (+)
G106742 NA non-coding downstream 107712 23941012 ~ 23971183 (+)
G106863 NA non-coding downstream 1086551 24919851 ~ 24943678 (+)
G106871 NA non-coding downstream 1105722 24939022 ~ 24940823 (+)
G106874 NA non-coding downstream 1153538 24986838 ~ 24991237 (+)
G106906 NA non-coding downstream 1214224 25047524 ~ 25049147 (+)
G106711 zgc:175280,slc7a1,LOC107719755,LOC107702889,LOC107557764,LOC103353344,LOC106563607 other upstream 76287 23748674 ~ 23753002 (+)
G106618 NA other upstream 472730 23356062 ~ 23356559 (+)
G106613 NA other upstream 487524 23341308 ~ 23341765 (+)
G106242 NA other upstream 3462066 20361208 ~ 20367223 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other upstream 3489964 20296011 ~ 20339325 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other downstream 2519 23835819 ~ 23844911 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other downstream 1774686 25607986 ~ 25662179 (+)
AMCG00011476 NA other downstream 2522867 26356167 ~ 26360775 (+)
G107202 NA other downstream 2937138 26770438 ~ 26771214 (+)
AMCG00011488 NA other downstream 2984752 26818052 ~ 26842792 (+)

Expression


Co-expression Network