AMCG00011947


Basic Information

Item Value
gene id AMCG00011947
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 7103316 ~ 7110756 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011947
GTTACAATCAGAGGAAgtaaagagtgagagagaaagagaagaggaagTACTCAGAGAAAAATGCCGGTGTGGTCGTCTGCGAGTCAGTCGGTTGATCAGTCGGACGCTGCGAGAGTTCATCAGTAAGGCAGTGTGTGAGTCAACAGGACAGAATGACGGACACAAAGAAACAGGGCACACCCATCCCGCCCGCACCACAGGAGGAGCCCAGCTTGAACCCGGCCGCACTGCCAGCATACTACCCACCTGAGGACGCCTACAGCCCACCCCCTTACCCCTCCAACCCCACCCCATACCCCGTGGGCACTGCAGAAAAAGACAACCCGGCTCTGCCCccagtgtgtgtggaggtggACGGTGTGGCAATGCAGCTCAGCGCCTTTGAGGACAAGATCGTCCGCAGAGCTTTCATTAGGAAGGTGTTCTGTGTGCTGGCCCTGCAGCTGCTGGTGACGTTCTCGGTGGTGTGCGTGTTCACGTTCAGTAAGCGGGTGAAGAAGGCGGTGCAGGAGAACCTCTGGGCCTACCTGAGCTCCTACATCCTGTTTGTGATCGTGGCCCTGGTGCTGCAGTTCAGCGGCTCCATCCGGCGCCGCCACCCCTGGAACCTGCTGGCGCTGGGCCTGGTGACGCTCAGCCTGTCCTATATGGTCGGCGCAGTGGCCTCTTTCCACGACACCACGGCCGTGCTGTTCGCCATGGGAACAACGCTGGTCATAGTGTTCGGCATCATCATCTTCTCCATCCAGACACGTGTGGACTTCTCCTACTGTAACGGTCTGCTGCTGGTGCTGGCGCTGGACCTGCTGATGTTCGGCCTGTTCTCCTGCTTCTTCTACTCCACCATCCTGCAGGTCCTGTATGGAGCCCTGGGGGCCCTCCTCTTCTCTGTGCTGGTGCTGGGCCGGGAGAAGTACGCTCTGAGCCCGGAGGAGTATGTGTTCGCCGCCCTGCTGCTGTACCTGGACATCATCATGATCTTCCTGTATCTGCTCATACTGCTGGGCGGAGGCTCCAGCAACTGA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011947 True 1025 mRNA 0.59 7 7103316 7110756

Neighbor

gene id symbol gene type direction distance location
AMCG00011954 NA coding upstream 9188 7093100 ~ 7094128 (+)
AMCG00011939 NA coding upstream 212362 6877975 ~ 6890954 (+)
AMCG00011933 NA coding upstream 240647 6859874 ~ 6862669 (+)
AMCG00011938 NA coding upstream 279825 6821673 ~ 6823491 (+)
AMCG00011923 NA coding upstream 322550 6775705 ~ 6780766 (+)
AMCG00011946 NA coding downstream 12214 7122970 ~ 7129481 (+)
AMCG00011955 NA coding downstream 60725 7171481 ~ 7176162 (+)
AMCG00011959 NA coding downstream 178291 7289047 ~ 7346943 (+)
AMCG00011958 NA coding downstream 236194 7346950 ~ 7361064 (+)
AMCG00011963 NA coding downstream 260428 7371184 ~ 7373535 (+)
G133577 NA non-coding upstream 7389 7095554 ~ 7095927 (+)
G133559 NA non-coding upstream 208239 6893978 ~ 6895077 (+)
G133536 NA non-coding upstream 216333 6863320 ~ 6886983 (+)
G133534 NA non-coding upstream 246543 6856181 ~ 6856773 (+)
G133508 NA non-coding upstream 321744 6780784 ~ 6781572 (+)
G133574 NA non-coding downstream 1608 7112364 ~ 7113067 (+)
G133583 NA non-coding downstream 7541 7118297 ~ 7118850 (+)
G133617 NA non-coding downstream 103479 7214235 ~ 7214462 (+)
G133642 NA non-coding downstream 243614 7354370 ~ 7354965 (+)
G133669 NA non-coding downstream 398993 7509749 ~ 7519294 (+)
AMCG00011917 NA other upstream 449585 6644876 ~ 6653731 (+)
AMCG00011909 ccnb1ip1 other upstream 542654 6545388 ~ 6560662 (+)
G133327 NA other upstream 614108 6483947 ~ 6489208 (+)
AMCG00011876 NA other upstream 842927 6255950 ~ 6260389 (+)
AMCG00011873 NA other upstream 1001305 6084852 ~ 6102011 (+)
AMCG00011948 NA other downstream 25112 7135868 ~ 7140132 (+)
G133619 NA other downstream 126185 7236941 ~ 7242300 (+)
G133667 NA other downstream 394326 7505082 ~ 7508751 (+)
AMCG00011971 NA other downstream 448907 7559663 ~ 7575192 (+)
AMCG00011987 NA other downstream 814380 7925136 ~ 7928238 (+)

Expression


Co-expression Network