AMCG00011954


Basic Information

Item Value
gene id AMCG00011954
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 7093100 ~ 7094128 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011954
ATGAACAATTCCAGCTACTATGATTACTTAGATGTTTTTTATGATAACTACTCCAATCAAAACAGCAGCTTTTCTGAAGGTTTCAGCAACTACGACAGCTACGTTAACTACTTCTACTCCATTGATCTGAGCGTGGACGAAGGCCCGATCACGGCCACCACTGTCTTCGTGTTCGCCTACAAGTTCAGCATCCTTTGTTTCGGGCTGCCGGCAAGCTGGCTGGCCATGTATGGTCTGTACCGGCTGCTGAGGTTCGAGAGGGCAGCACCCATCTACATGATCAACCTCCTCTTCGCCGATTTCATCCAGATCGTGCTCGTGTGGCTGGTGCAGATCCTGGACTCGCCACTGTGCATTGACTTTGAGGCAGATGACGTGATCTTTTTTACTGCTGTGAATGCCAGTGTGGGCTTCATACTGTGCATCGCCCTGGAGAGGTACCTGGTGGTCGCCCATCCTCTGTGGTACCGGTACCGCCGCACTGTCAAGTTCAGCGCCCTTGTGTCAGCGGGTGTGTGGGCTTTTGTCACCGTGGACACTGTGCTGTTTGTCTACCTCAGCACACACTCGCCAGCTGCCTCTTTCTGTTTCTGGACCATCCACTTCTTCCTGCCCATCCCAATCCTTATCTTCATCTTCCTCAGAACCAGGAGGGTGCTGGCCAGCACTGTGTCAGTCCGCGGCCCAGAGAAGAGGCGGATCCAGTGGATGCTGACTCTGGTCCTGTCCTCCTTCACAGCTCTCTTCCTCCCGTTCTACATGGCAAAGTGCTTCTTCTTCCTGAAGAGCATGTACAACTGGCAGACGCAGACCAAGGTTGatgtaattttccatttcatctGCCTGCTGCTCTTCACCCTTCACAACCTGCTGGACTCCATCTTATACATCTTCCTGCGCCGCAACATGCAGCGAACCCTGAGCTCCTGGTTGCCCTGCTGCCGGGGCTACCTGCTGAGGGACAGGGCTGAGTCGGGGGAGCGAGAGACCACGGTGCAGACTGTGGACTCCACTGTGACCAGCATGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011954 True 1029 mRNA 0.54 1 7093100 7094128

Neighbor

gene id symbol gene type direction distance location
AMCG00011939 NA coding upstream 202146 6877975 ~ 6890954 (+)
AMCG00011933 NA coding upstream 230431 6859874 ~ 6862669 (+)
AMCG00011938 NA coding upstream 269609 6821673 ~ 6823491 (+)
AMCG00011923 NA coding upstream 312334 6775705 ~ 6780766 (+)
AMCG00011932 NA coding upstream 386725 6701913 ~ 6706375 (+)
AMCG00011947 NA coding downstream 9188 7103316 ~ 7110756 (+)
AMCG00011946 NA coding downstream 28842 7122970 ~ 7129481 (+)
AMCG00011955 NA coding downstream 77353 7171481 ~ 7176162 (+)
AMCG00011959 NA coding downstream 194919 7289047 ~ 7346943 (+)
AMCG00011958 NA coding downstream 252822 7346950 ~ 7361064 (+)
G133559 NA non-coding upstream 198023 6893978 ~ 6895077 (+)
G133536 NA non-coding upstream 206117 6863320 ~ 6886983 (+)
G133534 NA non-coding upstream 236327 6856181 ~ 6856773 (+)
G133508 NA non-coding upstream 311528 6780784 ~ 6781572 (+)
G133491 NA non-coding upstream 342180 6749659 ~ 6750920 (+)
G133577 NA non-coding downstream 1426 7095554 ~ 7095927 (+)
G133574 NA non-coding downstream 18236 7112364 ~ 7113067 (+)
G133583 NA non-coding downstream 24169 7118297 ~ 7118850 (+)
G133617 NA non-coding downstream 120107 7214235 ~ 7214462 (+)
G133642 NA non-coding downstream 260242 7354370 ~ 7354965 (+)
AMCG00011917 NA other upstream 439369 6644876 ~ 6653731 (+)
AMCG00011909 ccnb1ip1 other upstream 532438 6545388 ~ 6560662 (+)
G133327 NA other upstream 603892 6483947 ~ 6489208 (+)
AMCG00011876 NA other upstream 832711 6255950 ~ 6260389 (+)
AMCG00011873 NA other upstream 991089 6084852 ~ 6102011 (+)
AMCG00011948 NA other downstream 41740 7135868 ~ 7140132 (+)
G133619 NA other downstream 142813 7236941 ~ 7242300 (+)
G133667 NA other downstream 410954 7505082 ~ 7508751 (+)
AMCG00011971 NA other downstream 465535 7559663 ~ 7575192 (+)
AMCG00011987 NA other downstream 831008 7925136 ~ 7928238 (+)

Expression


Co-expression Network