G133559


Basic Information

Item Value
gene id G133559
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 6893978 ~ 6895077 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU167530
CTCCACTACCCCCTCCTGCTCTTTCGTACCCGGGCCAGTTTGGAGGGGGGAGCGGGGGCTCCGAGTGGGGGGGGCAGTTCCAGGGCAGAGATGCGCTTGACCCCCCCAGGCTTGGACCGGGGGCCCCGCCGGGGGGGAAGCCTGAGGAGATGGTCCTGGAGTTCGCGGGCCACGGCTCCATCGGCCACATCACCCTTGAGGAAGtGAATGAGTTCATAGGAGACAATCTGACTGCCTTCCCCCACACAGACCTGGATGGAAGACCAGGCTAGActgaagagagacagagagacatggAGACCCTCAGAGGGACACAGGCCCTCACAGTCACACCCAGACACAAACTCATCTCACAccgacaaacacacacactgacactggacTGCACTTCTAAACAGAACACTCACAGAGGAATTCAAACACTACACCATTACAACACCACAGGGAAACCTACAGCCAAAACACCACGGCCTCCCATTCAGTCGAGAGCGGCACATGGAGGCACTCAGTGATATACGGGAGGAATTACCACCCCTGTGCTGTACTGTTACTGGCATGGTACTTAAGGGTCTGGCAGTAAATCCTACAataccattaaaaaacaaatatactgcAGTACTAGTGTAGTATTCCCCCTCCTGGTCCGTTTGCTCTCTCccagtgtatttaaattatcaccagcaatatttttcatattgataTAGATTGAtattcttcatattattatcTTACACATGTATATTTGTCCTGTTAACAGCATTTTACTCTTTCTACAATGACAGTTTGTTTGACAGTCTGCACTGTTCAGAGACCACTAGTACAAGTCACTTTGGTGAATCTTAATGTCTTTgcgtatatataaatgtttttaagctTTGTTTACTCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167530 True 888 lncRNA 0.49 2 6893978 6895077

Neighbor

gene id symbol gene type direction distance location
AMCG00011939 NA coding upstream 3024 6877975 ~ 6890954 (+)
AMCG00011933 NA coding upstream 31309 6859874 ~ 6862669 (+)
AMCG00011938 NA coding upstream 70487 6821673 ~ 6823491 (+)
AMCG00011923 NA coding upstream 113212 6775705 ~ 6780766 (+)
AMCG00011932 NA coding upstream 187603 6701913 ~ 6706375 (+)
AMCG00011954 NA coding downstream 198023 7093100 ~ 7094128 (+)
AMCG00011947 NA coding downstream 208239 7103316 ~ 7110756 (+)
AMCG00011946 NA coding downstream 227893 7122970 ~ 7129481 (+)
AMCG00011955 NA coding downstream 276404 7171481 ~ 7176162 (+)
AMCG00011959 NA coding downstream 393970 7289047 ~ 7346943 (+)
G133536 NA non-coding upstream 6995 6863320 ~ 6886983 (+)
G133534 NA non-coding upstream 37205 6856181 ~ 6856773 (+)
G133508 NA non-coding upstream 112406 6780784 ~ 6781572 (+)
G133491 NA non-coding upstream 143058 6749659 ~ 6750920 (+)
G133465 NA non-coding upstream 159015 6734232 ~ 6734963 (+)
G133577 NA non-coding downstream 200477 7095554 ~ 7095927 (+)
G133574 NA non-coding downstream 217287 7112364 ~ 7113067 (+)
G133583 NA non-coding downstream 223220 7118297 ~ 7118850 (+)
G133617 NA non-coding downstream 319158 7214235 ~ 7214462 (+)
G133642 NA non-coding downstream 459293 7354370 ~ 7354965 (+)
AMCG00011917 NA other upstream 240247 6644876 ~ 6653731 (+)
AMCG00011909 ccnb1ip1 other upstream 333316 6545388 ~ 6560662 (+)
G133327 NA other upstream 404770 6483947 ~ 6489208 (+)
AMCG00011876 NA other upstream 633589 6255950 ~ 6260389 (+)
AMCG00011873 NA other upstream 791967 6084852 ~ 6102011 (+)
AMCG00011948 NA other downstream 240791 7135868 ~ 7140132 (+)
G133619 NA other downstream 341864 7236941 ~ 7242300 (+)
G133667 NA other downstream 610005 7505082 ~ 7508751 (+)
AMCG00011971 NA other downstream 664586 7559663 ~ 7575192 (+)
AMCG00011987 NA other downstream 1030059 7925136 ~ 7928238 (+)

Expression


Co-expression Network