G133491


Basic Information

Item Value
gene id G133491
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 6749659 ~ 6750920 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU167439
TTGCTATGCAAGTAGACTATATTTACTGAGATTCCTTTAGGCAGTATTACATTCACAAGACAGTGTGCTACCAATAACATATCATTTGAATATCCTTATTATAAtgccattattaataaaaatgataagaacaataattatattaacagtaaacatttttctacagaaaaaaagttcctttcatttgattttcagATGTCTCTGCTGTTGACAGATATCAAGTATTGCACCtgccctctctgtctctgACTGACTctctgactgacagactgacacactgactgactctctgactgactgacacactgactgacagactgactgactctctgactgactgacacactgactgacagactgacacactgactgactctctgactgactgacacactgactgacagactgacacactgactgactctctgactgactgacacactgactgacagactgactgactctctgactgactgacacactgactgacagactgacacactgactgactctctgactgactgacacactgactgacagactgacacactgactgactctctgactgactgacacactgactgactgactgactgactctctgactgactgacacactgacagactgacagactgatttAAGCTCAACTTAAATATGATGGATGATGGATTTGGCATTGGTTAATGACCAGTATTGATTATGGATGAGTGCTAGGTATAAAGCATTGACTACTGCTTAGTGCTGAGTATTATTGATCAATCTTGATTATTGATCCGCATTAAATATTGATAAGTGCTGGCTGCTCATCAGTATTGATTTGTGGTCAGTGCTGGGTATTGGCAGTAAGCATTGACTGGTTCAGTATTGATTATTCAATGTAGATGAAGCAGACAGTATTTATTGATCAGTTTTGATGGTTGCTTATTAGACAGTATTGATTTCTGATAAGTGCTGGTCTTGATCTGTATTGGGGATTGATGACTGATCAGTATTGCTCAGTGATCAGGCGCGGTCAGTGTTGATGAAGTAGGTGGTCAGCTCTCCCTTGCCCTTGACCGACACGACGCCCCGCAGAGTCACGCTGAAGCCCAGAGACTCCACCACCAGGGCGGTCTCCTCTGTCacctggcagagagagagaggcaggttGAGAGGGGGGCAGTGAGTCGGTCAGTGTGTCAacgtctcagtgtgtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167439 True 1198 lncRNA 0.43 3 6749659 6750920

Neighbor

gene id symbol gene type direction distance location
AMCG00011932 NA coding upstream 43284 6701913 ~ 6706375 (+)
AMCG00011922 NA coding upstream 109326 6639722 ~ 6640333 (+)
AMCG00011907 NA coding upstream 181634 6567167 ~ 6568025 (+)
AMCG00011910 NA coding upstream 185844 6562099 ~ 6563815 (+)
AMCG00011908 LOC106600235 coding upstream 218623 6526859 ~ 6531036 (+)
AMCG00011923 NA coding downstream 24785 6775705 ~ 6780766 (+)
AMCG00011938 NA coding downstream 70753 6821673 ~ 6823491 (+)
AMCG00011933 NA coding downstream 108954 6859874 ~ 6862669 (+)
AMCG00011939 NA coding downstream 127055 6877975 ~ 6890954 (+)
AMCG00011954 NA coding downstream 342180 7093100 ~ 7094128 (+)
G133465 NA non-coding upstream 14696 6734232 ~ 6734963 (+)
G133440 NA non-coding upstream 31736 6676516 ~ 6717923 (+)
G133354 NA non-coding upstream 160001 6589416 ~ 6589658 (+)
G133350 NA non-coding upstream 171649 6566859 ~ 6578010 (+)
G133264 NA non-coding upstream 401953 6322766 ~ 6347706 (+)
G133508 NA non-coding downstream 29864 6780784 ~ 6781572 (+)
G133534 NA non-coding downstream 105261 6856181 ~ 6856773 (+)
G133536 NA non-coding downstream 112400 6863320 ~ 6886983 (+)
G133559 NA non-coding downstream 143058 6893978 ~ 6895077 (+)
G133577 NA non-coding downstream 344634 7095554 ~ 7095927 (+)
AMCG00011917 NA other upstream 95928 6644876 ~ 6653731 (+)
AMCG00011909 ccnb1ip1 other upstream 188997 6545388 ~ 6560662 (+)
G133327 NA other upstream 260451 6483947 ~ 6489208 (+)
AMCG00011876 NA other upstream 489270 6255950 ~ 6260389 (+)
AMCG00011873 NA other upstream 647648 6084852 ~ 6102011 (+)
AMCG00011948 NA other downstream 384948 7135868 ~ 7140132 (+)
G133619 NA other downstream 486021 7236941 ~ 7242300 (+)
G133667 NA other downstream 754162 7505082 ~ 7508751 (+)
AMCG00011971 NA other downstream 808743 7559663 ~ 7575192 (+)
AMCG00011987 NA other downstream 1174216 7925136 ~ 7928238 (+)

Expression


Co-expression Network