AMCG00015319


Basic Information

Item Value
gene id AMCG00015319
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7857079 ~ 7861747 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015319
ATGTACCGATCCACCAAGGGAGCCTCCAAGGCGAGGAGGGACCAGATCAACGCCGAGATTCGGAATTTAAAGGAGCTGCTGCCCATCTCCGAGGCGGACAAAGCCCGGCTCTCCTACCTGCACATCATGTCGCTGGCTTGCATGTACACCAGGAAGTCGGTGTTCTTCTCCCAGGGCGCGAGCTGCTCGGAAGACAGCGAGGGGCTCCTGTCCTTCCAAGACCTGTCCGAGTTCGTGCAGACGCTGCCCGGGTTCCTGCTCGTGGACCTGGTTGCGCAGGGGGACAGTGTGTATGACATCATCGACCCCACTGACCATTTTGTGATGAGGAGTAACCTTCTGCCTGCCCCCTCTGCAGACACAGAGCGCCTGTTCCGCTGTCGTTTCAACACGTCTCGCTCCGTGCGTCGGCAGAGTGCCGGGAACAAGCTGGTGCTGCTGCGCGGGCGCTTCCTGCAGCCACCGGCCGGGTCCTACTGGTCCTCCAATCCAGTGTTCATTGCCTTCTGCTCGCCGCTGGAGCCCCGCCCCCGCCCTGCCCCCGACGCCTTCTTCATGGCTTACTATGAGAGCACGCACGGCAAGGACATGGCATTCCAGCACGCCTCTGACAGTGCATCTTTCTACCTGGGCTATGCCAGAGCCAGCCTGCTGTCCCGGTCCTGGTACAGCCTGCTTCACCCGCAGGACCTCCTCCTGCAGCTGGACAGCAGGGATGGCCCAGTCACTGGACACAACTATGTCATCAGTGACTCTGAGGCGTGGGGTCTGAGGCAGCAGCTGGCCGCAGAGGAGACGCAGCTGGCGCTGGTTCTGCGCGCGTCTGCGTCTTACCGGGAGGCCCTGCTGCCGTCGCCAGGGACACTGTCCAGCCCGGACACCGTGTTCTCACCTGCCGCACTGGCCGTCCCTGTCTTCGAGTTCGGCGCGGTGTGCCCTGgggagggcgggggggcagAGGAGCCCATGCAGCTGGGGGGGCCGCGCTCCAGTATCTCCTCTATCGAGGAAGAGCCCACGGTCCCCCAAAACAACAACTCCGCCCCCAACCCCGCCCCCGGCGACGTCCTCGATTTCTTCTCCCAGAACTGTGGCTTCCTGCCCACCTTCCGTGCCGACGCCCCCTCCCTGctgcccccgccccccaaaGAGTTTGTCTGCACCCCCCCCTACACCCCTCAGCAGGGTGGCTGCAGCTTCATGTTCGGCAGCCCCGACCCTCCGACCTTCCTGCCCTCTGACCCCTCGACCTTCTCTCCCTCCGAAACCGCCACCTCGGAGCTGCTGTTCCCGTTGGAGGGCTGCGGCACCGCGCTGTACGAGAAGCTGCCGCCAACCCCCGACAGCCCCGGCGACGGTGACTGCACGGTGATGACGGTGCCCGAGCTACGGGGGCCGCTGTACATCGAGGTGCCCAGCGTGCCCGAGGGGCTGCTGACCCCCGAGGCCTCGCCCGTCAAGCCGCCCTGCGCCTCCTTCTTCAGCTGCCTGGACAAAGAGCGCTGTGACATCAGCCGGCTGGCCCAGCAGCTCAGCTCGCTGGCGGAGGGGCTGAGCGCTGCACTGCTCCCCGACCCCCTCTTCTCCAACAAGCCGGTGCCCCCCCTGCCCGACGCAGGGCTGCTGGTGGACATGTGCCAGCTGAAGCCCTGGAGGAGCATCGACTTCTCCCTGCTGGCGGACGAAGCCTCTCTGTTCGAAGAGAACATGTTCGACAGCCTCCTCAAGGACCTCTCCtccgccccctcctccccctcctccccctctccaccgcccccccctcccccgcctccctcccctcccaccTCCTGCAGCAACGCCACCTCCCTggacccccctccccacccaaCTGCCAAGCTGGGGGGCCAGGTGCTGGTGAGGTGTCCGGTGCCCCTCTGTGGCGGGGCACTGCCGGGCTCCAGTGGTCGTCCAGGCCTCAGGCCGGACGCAGCGGATCCTCGCGTCGAAGCGGCGCACCCTAGTAGTGTGGGGGGGGCCGCGGGGAGGGCGTCTATGGAGGcgcccctcccccctccctccaccgACCTGTCTCCGGAAGAGCAGTCCTTCCTAGAAGAGCTGGCCTCGTATGAAACAGTGTTTGAGGCATGTGCCTCGAGCGGACCCTGTGAGGGGTTCCACGATGAGTTGTATCAACTCCAGAATCACATGGCTGACAGCTTCCATCATGATGGGAGTGGAAGTGATCCTTCGTTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015319 True 2220 mRNA 0.66 8 7857079 7861747

Neighbor

gene id symbol gene type direction distance location
AMCG00015318 NA coding downstream 22859 7833318 ~ 7834220 (-)
AMCG00015321 mrps12 coding downstream 28965 7826681 ~ 7828114 (-)
AMCG00015320 LOC107707189 coding downstream 31319 7821194 ~ 7825760 (-)
AMCG00015314 NA coding downstream 99860 7748342 ~ 7757219 (-)
AMCG00015313 NA coding downstream 146811 7707910 ~ 7710268 (-)
AMCG00015329 NA coding upstream 15687 7877434 ~ 7885936 (-)
AMCG00015327 NA coding upstream 26878 7888625 ~ 7897453 (-)
AMCG00015326 NA coding upstream 41831 7903578 ~ 7908926 (-)
AMCG00015330 mus81 coding upstream 53324 7915071 ~ 7921825 (-)
AMCG00015328 NA coding upstream 77390 7939137 ~ 7941984 (-)
G97134 NA non-coding downstream 36890 7819804 ~ 7820189 (-)
G97130 NA non-coding downstream 41677 7814894 ~ 7815402 (-)
G97121 NA non-coding downstream 76481 7780392 ~ 7780598 (-)
G97041 NA non-coding downstream 237562 7497942 ~ 7619517 (-)
G96994 NA non-coding downstream 492080 7362385 ~ 7364999 (-)
G97221 NA non-coding upstream 107850 7969597 ~ 7970757 (-)
G97244 NA non-coding upstream 139739 8001486 ~ 8016073 (-)
G97395 NA non-coding upstream 207033 8068780 ~ 8069037 (-)
G97409 gng3,LOC107559409 non-coding upstream 262521 8124268 ~ 8126464 (-)
G97475 NA non-coding upstream 570176 8431923 ~ 8433316 (-)
G97125 NA other downstream 70637 7786087 ~ 7786442 (-)
AMCG00015305 NA other downstream 408785 7390889 ~ 7448294 (-)
AMCG00015288 NA other downstream 933365 6917679 ~ 6923714 (-)
AMCG00015285 NA other downstream 960652 6891235 ~ 6896427 (-)
AMCG00015283 NA other downstream 979345 6870462 ~ 6877734 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other upstream 208288 8070035 ~ 8091826 (-)
G97411 NA other upstream 269560 8131307 ~ 8134115 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 361452 8223199 ~ 8283629 (-)
AMCG00015361 NA other upstream 499867 8361614 ~ 8370031 (-)
G97455 mark2a,LOC107715377 other upstream 548240 8409987 ~ 8411882 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G6811 NA unknown CI01000000 null 10204831 ~ 10321679 (+)