AMCG00015347


Basic Information

Item Value
gene id AMCG00015347
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8249954 ~ 8259772 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015347
GCGGCGCTGTCGGGGCTCTTCTCGGCGTGGCGTGGCGTGACGTGGCGTGACGTCACTGCCGAGCAGCCTGGTGTCGTGCCGGGAGGGAGCCGTGGCGAAAGCAGGGACACCACCGACAGCGGCCGCCCGGGGGCACCGAGCAGCGGGAGAGCGCAGCGTGGGCTGCTGGACAGAGTGCGCTGTTCAAGCCGCTCCTGCACTCCCCAGCCCCCCTCTGATGCTCCGGGGCCAGTCTGCGTGTGACGGCGGGACGGTTCTGCGATGAGCTGGGCGCTGGAGGACTGGACGGCGGGGCTGCCGGGCCGGGAGCGGGAGAAAGCCCGTGAGCTGCAGGCCCGGCTGGATGAGCTGCTGCGGGAGAAGAAGCAGCGGCAGTTCCAGCTGGAGACGGTGGAGGTGGCTCTGCACAAGCAGCGGCTGCAGATTGAGGAGGAGAGGGTGGTGGCAGCGGGGCTGCGGCGGGAGCTCCAGGTGGCGGGTGAGGCGGAGAATGCAGGGCGACGGGCGAGGGAGCGCCTCTCGCAGGAGCTGCAGGTGAAGGACGGCCAGGTGTGCGCCCTGGAGGGGCAGCTGAGCGCCGCCCACAAACAGGTGGACAGCCTGCAGCAGGAGCTCAAACGgctccAGGCTAAGCTGCAGAATTCCCAGGGCTCCGGAGACTCTGTGCTTTTCTCCACCCCCAGCTGGAGCCCCCCTGGACTCTCCTCCCCCTGCCGGGACCGCACGGAGTCACAGGGGGACAGCAAGGATGGTTTCCAACGCGACAGGCTGAGAGAGCAGGAGACCAGGGGTGTGCACGTCAAAcagctcctgttCAGCAGCAGCGACCGGAGCCTTAAGCCAGTCAGGGGGGGCGACTCCTCCCCATTCCCCTGGCAACAGGAGACCACGCCTGTCCGTCGGCCGCCCCGCCAACCTGAGGTTTCCGTCCGCAAGGGGGGCTCCAGCCACATGACCTCAGGCTCCTCCCCCTCGTCTGTGTTTCCCTGGGAAAAGGAGAAAAGCTTGCCCACACCCAGAGGGCAACAGGGGGGTAATCCCGCCCCCTCGCAACAGAGCAGCAGTGATGTCAATGACAGCGAGAGCCCAGCGCACTCTGGGGTGGAGGAGGACCTCCGAAAAGAGAATGCAGTGCTGCAGTGCACGGTGCTGGAGCTGGAGACCTGGGTTCAGGCCCTGGAGAAGGAGGTGCAGGCGGAGAAGAGCCGGGCCACAGAGGCCGAGCGCGCGCTGAATGCCCAGGGGCTCAGTCTGACCCAGTGCAGGGAGGAGCTAAACCGCTGCAGCGCCCGCGCCGAGCAGCAGCACAGCCAGtgCCAGTCTGCGGAGCAGCGTCTGAAGCAGCTGGCAGAGGAGCTGAACTGCCACCGTCAGAACAGTGACCTCGCCCGCCGCCAGGCCGAGCAGCGCCTCCGCCAGACCGAGAAAGAACACCAGCAGGACCTGGCGGAGCAACAGCGTCTGAGTGCggagctggagaggagacaCCAGCAGGAGAGCAGCCGGCTCACCCAGGAGCTGCAGCAGGCCAGAGCCCAGCACCTCACCCTGCAAGCCCACACTGACAAGCTGGGGCTGCAGAAGCAGTGTGTGGAGAGGGAGCTGGAGTCTGTGAGGGAGAGGCTGCGTTGCACAGAGAAGGAGCTGAAGGACAGccagaggagggaggaggaacTGCAGAGACACCTGATGGAGGTGCTGCGTGAGAAGGACAGCGTGGGTGCCAGTCTGGAGCAGAGTTTGCGGAGGGGGCGAAGCCTGGAGGAGGAAGTGAACAGGCTGACACAGGAAGTGGCCGCCATTCAGAAGCTGCTGGATGACCTGCGAGCCCTCCAGGCTTCTCCCCCCCATGTCCCCGAGGCCCCCGTCAGGATCTCGCAGGCAGGAGGAGGGGGCTGCAGTCTCAGCCCCAAGTTGGTCAAGCGCCGTCCCCGGTCCCAGAGGAGTGGAGGGGCGGGTCAGAGGGAGACGCCCACGCAGGGCAGGGAGCCGGCAGAAGGCAGAGATGCTTCAGAGACGCAGGAACCTGAGTGGGGGGGAACTGTTACacaggaggaggagacggaggaagaggaaggagagagatcCCAGGAAGGGAGAGTAGAGACGGAGGCAGCTCTTTGcaaggagagggagacagggagatgGAAGGAAGGTGGGAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015347 True 2165 mRNA 0.66 13 8249954 8259772

Neighbor

gene id symbol gene type direction distance location
AMCG00015351 NA coding downstream 13170 8231238 ~ 8236784 (-)
AMCG00015355 NA coding downstream 21596 8227090 ~ 8228358 (-)
AMCG00015349 NA coding downstream 41588 8202869 ~ 8208366 (-)
AMCG00015353 NA coding downstream 47388 8201563 ~ 8202566 (-)
AMCG00015354 NA coding downstream 56324 8191510 ~ 8193630 (-)
AMCG00015350 NA coding upstream 6024 8265796 ~ 8275867 (-)
AMCG00015360 NA coding upstream 91910 8351682 ~ 8352986 (-)
AMCG00015366 NA coding upstream 153638 8413410 ~ 8417776 (-)
AMCG00015367 calm1,LOC102293206,LOC102778633,LOC107396020 coding upstream 219344 8479116 ~ 8481362 (-)
AMCG00015373 NA coding upstream 226779 8486551 ~ 8494860 (-)
G97409 gng3,LOC107559409 non-coding downstream 123490 8124268 ~ 8126464 (-)
G97395 NA non-coding downstream 180917 8068780 ~ 8069037 (-)
G97244 NA non-coding downstream 233881 8001486 ~ 8016073 (-)
G97221 NA non-coding downstream 279197 7969597 ~ 7970757 (-)
G97134 NA non-coding downstream 429765 7819804 ~ 7820189 (-)
G97475 NA non-coding upstream 172151 8431923 ~ 8433316 (-)
G97536 NA non-coding upstream 336963 8596735 ~ 8598299 (-)
G97561 NA non-coding upstream 351175 8610947 ~ 8611396 (-)
G97562 NA non-coding upstream 352723 8612495 ~ 8634660 (-)
G97574 NA non-coding upstream 395401 8655173 ~ 8656821 (-)
G97411 NA other downstream 115839 8131307 ~ 8134115 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other downstream 158128 8070035 ~ 8091826 (-)
G97125 NA other downstream 463512 7786087 ~ 7786442 (-)
AMCG00015305 NA other downstream 801660 7390889 ~ 7448294 (-)
AMCG00015288 NA other downstream 1326240 6917679 ~ 6923714 (-)
AMCG00015361 NA other upstream 101842 8361614 ~ 8370031 (-)
G97455 mark2a,LOC107715377 other upstream 150215 8409987 ~ 8411882 (-)
AMCG00015374 NA other upstream 281416 8541188 ~ 8545795 (-)
AMCG00015372 lrfn4,LOC101077706,LOC106517947,LOC102210474,LOC101487083,LOC102311587 other upstream 319728 8579500 ~ 8582686 (-)
AMCG00015393 zgc:77262,LOC107715378,LOC107669316,LOC107568302,LOC108428054,LOC107567914,LOC108278748,LOC107700012 other upstream 529888 8789660 ~ 8794774 (-)

Expression


Co-expression Network