AMCG00018121


Basic Information

Item Value
gene id AMCG00018121
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2200435 ~ 2203330 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018121
ATGACCTGCATAGGAACGCAGTGCAGCGAGTGGAGCGTGTCCCCTCGTCATTACAGACCGAGGCTGGGGGGCCACAATCCGTCCTCCGCCCCCTCCCTGACTCAGAGAAACACAGCTGCCCTCACCCCCCCCGCCCTGCAGCCTTGGGCACAGCGACGTCAGGGCAGAGCGGGACTGGGCCCCAGCGCCAGGGGGACGCTCAGCTGGGGGGTCCTGTTCAGCTACGAATGTGTCTTGCCTTCTCAGCAGCTCGGAGGGTTGGAGGCCGGGCTGAGAGAGAGCACAGAAAGAAGGCCGCTGCTGAATTCCAGTGTAATAACGCTTAATAAAGCGACTGCAGTGGCTTTGAACATCTGGCCGAGCCCAGTCAGTCTCCACAGCTGGAGCGGCTTggctctCATCCCTCTGTTCGACCCTGACACCGGCCTGCTGGTGCTGTCTGGACAGGGGGACAGTGTGATCCACTGCTTCGAGGTCACCTCCAGCCAACCCTTCCTCGCTCCTGGTACGCCTCCTCCGTTCAGCCCGACCTCTTCCTCTCGCTGTCCCCCCACGGTTCGGTCACGCGTGAGCCAGTGTCTGACTGAGGCTGCCACCAAAGGGATCGCCCTGGTGCCCAAGCTGGCTGTCGATGTCACTTCCTGTGAGGTCATGCGGGTCCTGCAGCTGACGGACAGCTTCATCGTGCCCGTGAGCTACCATGTGCCCCGCAAGTCAGGGCAGGACTTCCACGGAGACCTGTACCCCGACACCCGAGGCCAGAGCGCTGCCGTGTCTGCGCAGGAGTGGTGGGGCGGGGAGAACAGACAGGTACGTCCCAGCAGCTCCGGCAGCCTGgcgccctccccctccaccGGCAGCGGTCCGTCCAGCGGTTTCGCCTCCAGCCCCAGCCAGCGCTCACTGCAAAACATCCTGGgccccAGTTCCAAGTTCCGTCACGCGCAGGGCTCGGTTCTGCACCGCAACACACACATCACCAACCTGAAGGGGCTCAACCTCACCACACCAGGGGAGTGCGATGGCCTGTGTGTGAACCGGGAGCGCATGGCCGTGCCGCTGGCCATCGCCGGGGGGCAGATCGCCGTCTTCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018121 True 1095 mRNA 0.64 9 2200435 2203330

Neighbor

gene id symbol gene type direction distance location
AMCG00018116 NA coding upstream 81645 2116615 ~ 2118790 (+)
AMCG00018114 NA coding upstream 95653 2095555 ~ 2104782 (+)
AMCG00018115 NA coding upstream 105309 2080184 ~ 2095126 (+)
AMCG00018102 ttyh3,LOC106607330,LOC106601124 coding upstream 353525 1811435 ~ 1846910 (+)
AMCG00018104 NA coding upstream 398207 1796402 ~ 1802228 (+)
AMCG00018120 LOC106601835,LOC107695711 coding downstream 8179 2211509 ~ 2212924 (+)
AMCG00018124 srl,LOC107661647,LOC107718567,LOC107553668,LOC107695714 coding downstream 78367 2281697 ~ 2291760 (+)
AMCG00018125 NA coding downstream 99634 2302964 ~ 2305444 (+)
AMCG00018127 NA coding downstream 125374 2328704 ~ 2334031 (+)
AMCG00018126 crebbpb,LOC108440697,LOC102779454 coding downstream 152947 2356277 ~ 2382087 (+)
G114359 NA non-coding upstream 150258 2048571 ~ 2050177 (+)
G114346 NA non-coding upstream 178805 2006906 ~ 2021630 (+)
G114332 NA non-coding upstream 216285 1983651 ~ 1984150 (+)
G114326 NA non-coding upstream 230026 1969780 ~ 1970409 (+)
G114323 NA non-coding upstream 247171 1952874 ~ 1953264 (+)
G114484 NA non-coding downstream 207147 2410477 ~ 2412789 (+)
G114485 NA non-coding downstream 213477 2416807 ~ 2417796 (+)
G114531 NA non-coding downstream 370307 2573637 ~ 2573867 (+)
G114548 LOC104962440 non-coding downstream 405813 2609143 ~ 2609412 (+)
G114553 NA non-coding downstream 465130 2668460 ~ 2668661 (+)
AMCG00018106 NA other upstream 217869 1979046 ~ 1982566 (+)
G114330 NA other upstream 221708 1977004 ~ 1978727 (+)
AMCG00018105 NA other upstream 226511 1972838 ~ 1973924 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other upstream 250842 1947841 ~ 1949593 (+)
G114219 NA other upstream 980219 1219779 ~ 1220216 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other downstream 44523 2247853 ~ 2266775 (+)
G114518 NA other downstream 287983 2491313 ~ 2568938 (+)
G114551 NA other downstream 437516 2640846 ~ 2647774 (+)
AMCG00018196 NA other downstream 1983080 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 2391603 4594933 ~ 4604105 (+)

Expression


Co-expression Network