G114531


Basic Information

Item Value
gene id G114531
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2573637 ~ 2573867 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU143435
ctcataGTGATTTATTgcatcttttatttgtttggcagaTGTACCCAAAGGAAACGaactgtaaaacacacaaacattatgTACATTATGTCTAATCTCTTTTTCTGACAGCGTAATCCGTGGCACTCTATACTCGGCCTGGATGATGTAACTgacgccattttggctcatacagaGATATGTCTAATGCACTAAGCAAGAGAGAATTTGGAACCAACATGGCACATACGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143435 True 231 lncRNA 0.39 1 2573637 2573867

Neighbor

gene id symbol gene type direction distance location
AMCG00018132 NA coding upstream 108879 2449789 ~ 2464758 (+)
AMCG00018130 LOC105893914,LOC107598040,LOC107571734 coding upstream 130109 2434456 ~ 2443528 (+)
AMCG00018133 NA coding upstream 139981 2433398 ~ 2433656 (+)
AMCG00018131 NA coding upstream 140655 2421265 ~ 2432982 (+)
AMCG00018128 NA coding upstream 172228 2393305 ~ 2401409 (+)
AMCG00018138 NA coding downstream 528 2574395 ~ 2579357 (+)
AMCG00018146 NA coding downstream 124961 2698828 ~ 2717437 (+)
AMCG00018145 NA coding downstream 143635 2717502 ~ 2747393 (+)
AMCG00018144 NA coding downstream 209195 2783062 ~ 2786522 (+)
AMCG00018149 LOC107753764,LOC107661878,LOC107718604 coding downstream 214506 2788373 ~ 2793873 (+)
G114485 NA non-coding upstream 155841 2416807 ~ 2417796 (+)
G114484 NA non-coding upstream 160848 2410477 ~ 2412789 (+)
G114359 NA non-coding upstream 523460 2048571 ~ 2050177 (+)
G114346 NA non-coding upstream 552007 2006906 ~ 2021630 (+)
G114332 NA non-coding upstream 589487 1983651 ~ 1984150 (+)
G114548 LOC104962440 non-coding downstream 35276 2609143 ~ 2609412 (+)
G114553 NA non-coding downstream 94593 2668460 ~ 2668661 (+)
G114555 NA non-coding downstream 97040 2670907 ~ 2742686 (+)
G114613 NA non-coding downstream 270438 2844305 ~ 2845453 (+)
G114624 NA non-coding downstream 291121 2864988 ~ 2867237 (+)
G114518 NA other upstream 4699 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 306862 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 591071 1979046 ~ 1982566 (+)
G114330 NA other upstream 594910 1977004 ~ 1978727 (+)
AMCG00018105 NA other upstream 599713 1972838 ~ 1973924 (+)
G114551 NA other downstream 66979 2640846 ~ 2647774 (+)
AMCG00018196 NA other downstream 1612543 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 2021066 4594933 ~ 4604105 (+)
G115049 NA other downstream 2187651 4761518 ~ 4763905 (+)
G115299 NA other downstream 3375596 5949463 ~ 5951017 (+)

Expression


Co-expression Network