AMCG00018131


Basic Information

Item Value
gene id AMCG00018131
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2421265 ~ 2432982 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018131
CCGGGAGGCGCTGTTGGCGCGGGAAGATGGCGGCGCTGGGGGCGGCCGGCGGGCGGCGCGTCCCTCCTCAACCGACAGCGATTCAATAAACATGTCGGCGAGAGCAGGACCCGCACACCGCGCCGATACTGGATCATCTCGCCGCAGACCAGACGAGCAGTCCAGACAGCCGGCTTTAAACAGCCAGTGTCAGATCGGCCGGCCCGAAATGGAGAGCTACGAGGAGTTCTGCACCCATAGCCTGGCGCGTCTTCAGGCGGAGGGGCCACTGAGCAGCGTGACCACCGGCCAACGGGGGGCGCTCTCCATCATCCAGTTCCATGGCATGGCAGTTCTGTCTCCTCTGCTGAGTGCGGAGCAGCGGCAGGAGATGACGCAGTACCGGCAACGCGCCGTGGAGCTGGAGGCTGGCCGGCTCAGTGTGCGCCGGAGCACCCTGCTGTCCCGGGTACAGGACATCCTGGACAGCGTGCAGATGCGCACGGTGCCAAAGGAGGGAGAGACGGCCATGGCCCCCAGCCGCTGCTCCCCCAAGTCGGAGGTCATGAATGGCTTTGCTCTGCTGCCGGACATGAACGCGCTGGGGCCCTGGGGGGGCAGTGTCCCGCTGAGAGCCGCCCCCAGTGAGCCGCTCCCTCAGCCCGACAGGGAGCGGGGGGAGTTGGAGGAGGAGGACCCCAGCTACACCATGAGCCTACAGAGCCTGCTGAAGAAGTCCCGGGAGTACCTGGAGAGAGAGCACAGCCGGCGCGGGTCCCGGGGCCACAAGGGGGCGCCGGCGCTGGGCGAGAGCCTCTCGGACAAGGAGAACGAGAGCGGCGGGGGCAgtgtgggggcggggggcgaGCAGCCTCACTGTGAGGACCACCAACACAGTGACAGCCCCCTGGCCTGGCCCACCACCCCTGCCCCCGTCCAGCAGCCGAGCTCGGACTCGGACAGCCCCGACTCTCTGTCTGTTCTGCCCCGCAGCCTGACGGGCTCCTACGCCCGGCTGCCCAGCCCCGAGCCCAGCCTGAGCCCCCGGGTGCACCGCCGCCGCCCCCGGCCCCTGTCGGCAGGGAACATCGTCATCACGCGGCCCCTCAGCGCCTGCGAGCTCAGCCCCCGCCCGGACAGGCAGCCCCTGCACGAGGACAGCGCCGTGCCAACACTGCAGGCTGTGCCGGGAGAGCCGGGCCCCTGGGAGCCCAGAGTGGAGCCCTGCCCGGCTGAGCTAAGGGTGCCCTCCACCCCGCACAAGAGGCAGAGCAGCCCCCTGGGCCAGGAGGAGACGCTGGGAAGGGAGACCCCCGAGTTCCGCAAGCGCTCGCAGACCCTGGACAGCCAACTCTCCCCCGCCGGCCCGCGGGGCTCCCAGGAGAGGATCCCCGGCTTCCTGGGCAGCCTGCCCCGGCGAGTTCCCCGCCGCCGCTGCTCCCCGGCCCCCCTCAACCAGTCCTACGACGTGGAGAGCCCCTCGCCCGCCCTGCTGCGGCCCTGTGTGGACGGCGCCTCGCCTGAGGGGGGCTCTGCCAAAAAGAAGCTGGAGGCCTCCCAGGGGTCCAGAGAGGGCAGGCTGACTCCCAGTCTACCGGCCACCCCCGGGGAAGAGCCGCGCGGGTGGGATCAGACGCCTGGCAGCAGCGTGGGCGAGGGGCCGGTCAAGAGGCAGGCCGCGGACGCCGGCCCGGACTGGAGGGGCATCAGTGAGAGCTGCCCCGCCGGCCCCACGGTGGCCCAGGGAGAGCGCTCGCCCACCCACATGTCGCACAGCCTAGGTTTCCCCCCCCAGCCCGTCGCCTCGAGCCAGTCACCCTTCTACCTGCGGGGGCCGTCCTGGATGGGCAATAAGCCCCGGAGCAGAGTGTCTCAGGCCATCCCCCCTGAGCTGCACCAGCGCTTCTGTAGGCTGAGCGCCGTGGCCAAGGGCTTCCTGACGCGCCGGCTGCTGCTCACGGAGAAGGTCAAGCACCTGCGGCAGACAGTGCAGGACACCCAGGAGTTCATCAAGACCTTCCAGAGCGAAGCCCCCCTGAAGAGAGGGGCCGTGTCTCCCCAGGACATGTCCCTGCAGGAGAGAGTGCTGGCCCAGCTGCGGGCGGCGCTGTTCGACCTGCATGACGTCTTCTTCGAGATGCCGCTGAGCGAGAGGCTGGCGCTGCTGCAGCAGGACCGGCAGCTGCGCACAGAGAGGAGGCTGAGGGAGATGGAGAAAGCCAGGAGCCCCAGAGAGAGAGTCACACTGTCAGCTGCCACACAGAAGTCCCTGGACCGGAAGAAGCAGAGCAGAGCCGCAGACACGGGGGGGCACAACAGGAAGGCCACGCAGAAGCCGAAGAGCCCGACAACAAACAGGATCCTGCAGCCGAACCAGGGCCAGAACGCCCCCCCGCCCGGGCAGCTGCACCGACAGgggagTCTGTACCAGAAGAACCTGGAGGAGCGTGTGAAGCGCTGCGACAGCCTGAGGAAGCAGCACTCCCTGGCGACTCGGACCCGCTCCTCCTTCAGGCTTTTACTGAAGGCGTTTATTGACACTCCTGAGAACGAGCAGATGCCATTGTTTTACCAGCATGCCAAATTAGAGAGCCGGGTCTGCGTGCCTGAGGATCCCCGATCGTGGCCGGATCGTGGCTGTGCCACGGTGGCCAGTACCTCAGGCCTGGTTTCCCCTGAGGCGCGGGGAGATCCATCGCTCTCTCCCCACGATGAGATCCGTGAGGCTGAGCTCAGGCGAGGCCATCTGTTGGTCAGAGAACACAGATATCTGTGTGTTCAGATCGTGTCTCAACGCTGGGATGGGACACCGAGGCGAGGGGCTCCCACGCCAACATCCAACCCCCACCTCCACCTAGAAACAGTGCAGCTAACAGACCCCCATaccctcagTTTTGCCAAGTCTATGTCTGTGCCCGGCTTCCTGCCCGGTGCCGGCGCTGTCTGGGTACGGCCTGCCTCGTGTCTCAGTCAGGCCCTGTGTCCTCCTTCAGGCTGA

Function

GO: NA

KEGG:

id description
K16453 CCP110, CEP110; centrosomal protein CEP110

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018131 True 2977 mRNA 0.68 16 2421265 2432982

Neighbor

gene id symbol gene type direction distance location
AMCG00018128 NA coding upstream 19856 2393305 ~ 2401409 (+)
AMCG00018129 trap1 coding upstream 29267 2385300 ~ 2391998 (+)
AMCG00018126 crebbpb,LOC108440697,LOC102779454 coding upstream 39178 2356277 ~ 2382087 (+)
AMCG00018127 NA coding upstream 87234 2328704 ~ 2334031 (+)
AMCG00018125 NA coding upstream 115821 2302964 ~ 2305444 (+)
AMCG00018133 NA coding downstream 416 2433398 ~ 2433656 (+)
AMCG00018130 LOC105893914,LOC107598040,LOC107571734 coding downstream 1474 2434456 ~ 2443528 (+)
AMCG00018132 NA coding downstream 16807 2449789 ~ 2464758 (+)
AMCG00018138 NA coding downstream 141413 2574395 ~ 2579357 (+)
AMCG00018146 NA coding downstream 265846 2698828 ~ 2717437 (+)
G114485 NA non-coding upstream 3469 2416807 ~ 2417796 (+)
G114484 NA non-coding upstream 8476 2410477 ~ 2412789 (+)
G114359 NA non-coding upstream 371088 2048571 ~ 2050177 (+)
G114346 NA non-coding upstream 399635 2006906 ~ 2021630 (+)
G114332 NA non-coding upstream 437115 1983651 ~ 1984150 (+)
G114531 NA non-coding downstream 140655 2573637 ~ 2573867 (+)
G114548 LOC104962440 non-coding downstream 176161 2609143 ~ 2609412 (+)
G114553 NA non-coding downstream 235478 2668460 ~ 2668661 (+)
G114555 NA non-coding downstream 237925 2670907 ~ 2742686 (+)
G114613 NA non-coding downstream 411323 2844305 ~ 2845453 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 154490 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 438699 1979046 ~ 1982566 (+)
G114330 NA other upstream 442538 1977004 ~ 1978727 (+)
AMCG00018105 NA other upstream 447341 1972838 ~ 1973924 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other upstream 471672 1947841 ~ 1949593 (+)
G114518 NA other downstream 58331 2491313 ~ 2568938 (+)
G114551 NA other downstream 207864 2640846 ~ 2647774 (+)
AMCG00018196 NA other downstream 1753428 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 2161951 4594933 ~ 4604105 (+)
G115049 NA other downstream 2328536 4761518 ~ 4763905 (+)

Expression


Co-expression Network