AMCG00018132


Basic Information

Item Value
gene id AMCG00018132
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2449789 ~ 2464758 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018132
ATGGACCCAGTCGACCTGAACAGGAAGACCCGCAGAACAGACCGGTTTTCCCAGTTTGAGGCGGCGCAGCCCCGCGCCCCTGACCATGTCTGGACCGACACCGGCTCCGTGGCCACCGACGTCACCCAGTACAGCGCCAGCAAGCACACGCCTGTGTTCTACAGCCTCCTGGCCGCCAAGgtggcGGTGGACAGTGACCCGCTGGAACACTTCGACCCGCTCCTCTCCCACCCTGCCTTGGCCGGCTACACCGTGTCGGAGAGACCCCCGCCTCCCAGCCAGACCCCCACGCCGCAGCCCAATCAGCCCACCAACTGTGAGCAGTTCCTGGAGTGCAGTGTCTTCCCTGTGCTGCAGCCCGGACTGGAGGCCATGCTGAGAGAGGCTCAGACACAGCACTGCCTGGAGAGAAAGAGGCTGTGGTCAGGGTGCTCGGACAGGCCGGGCCCTGGTGTGCGCTGTGAAGCTCTGAGCTCTCGACGCGCTGGCCCTGAGAGCGGTAAAAACCCCCGCAGACGGGAGCAGCAGCCAGTGGGCTTTGAGGAGATCCCTTTCGTGGCGGACTGGCTGAGAGAGCAtcCTAGGCCTCCTGTTCCTCTGTCTTTGCTGCTGTCAGAAAATGAGGCTGCAGTTCTGATCCAGTCCTTCTGGAGAGGCTACAAGAGTGAAATCAAGCCCGCACTTAAGGGAGCAGCTGCCGTGTTTAACACCGCGTCCAGCACCGGAGATGTTTTATGCAGCTGCCTGTGCCGGAGTGAGCGAGAGCGAGAGTGTGGGGGCCAGTCCGTGCTGGAGAGCAGCGCTCCGGTCCGCCGCGAAGAGGAGGTACAGGAGCTGCGCCAGTGGCAGAGGGAGCTGAGAGAAGAGAGCCGCAGCATCAGCGAAAGAGTGGAGGAGTTCTGGGCCCAGTGCGAGTCccgagTGGGCAGCAGCATGGAGGACCCCCAGCTCAACCACTCCGGAGTGTCCATCCGGGTGCTGTCCCCGACCCCACAGAACACTGTCATCCTGCCTTCCACGACACCCAACAGCGCCGCCCTGTCCCCCGCTCCCTTCGGCACCGAAGACCTGTGACGCCACCTCGGTTCCGGCCCATCTACGGGGGCTTCTCCATCCCGGGACAAAGCCCTCTTACTGGCCGTCAAGAGCTAAAAGCATTCCTAAGTCCAGTTTGTCAACAAAGCGAATTACCTCACGAGGCCGGCAAGCAACATGGCCTATTCATAGATTTCACTGAatcagcaaaataaacacagagggAAAGAAAAGTCTCTCAATGTCAgtagtcattttgttttttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018132 True 1301 mRNA 0.61 10 2449789 2464758

Neighbor

gene id symbol gene type direction distance location
AMCG00018130 LOC105893914,LOC107598040,LOC107571734 coding upstream 6261 2434456 ~ 2443528 (+)
AMCG00018133 NA coding upstream 16133 2433398 ~ 2433656 (+)
AMCG00018131 NA coding upstream 16807 2421265 ~ 2432982 (+)
AMCG00018128 NA coding upstream 48380 2393305 ~ 2401409 (+)
AMCG00018129 trap1 coding upstream 57791 2385300 ~ 2391998 (+)
AMCG00018138 NA coding downstream 109637 2574395 ~ 2579357 (+)
AMCG00018146 NA coding downstream 234070 2698828 ~ 2717437 (+)
AMCG00018145 NA coding downstream 252744 2717502 ~ 2747393 (+)
AMCG00018144 NA coding downstream 318304 2783062 ~ 2786522 (+)
AMCG00018149 LOC107753764,LOC107661878,LOC107718604 coding downstream 323615 2788373 ~ 2793873 (+)
G114485 NA non-coding upstream 31993 2416807 ~ 2417796 (+)
G114484 NA non-coding upstream 37000 2410477 ~ 2412789 (+)
G114359 NA non-coding upstream 399612 2048571 ~ 2050177 (+)
G114346 NA non-coding upstream 428159 2006906 ~ 2021630 (+)
G114332 NA non-coding upstream 465639 1983651 ~ 1984150 (+)
G114531 NA non-coding downstream 108879 2573637 ~ 2573867 (+)
G114548 LOC104962440 non-coding downstream 144385 2609143 ~ 2609412 (+)
G114553 NA non-coding downstream 203702 2668460 ~ 2668661 (+)
G114555 NA non-coding downstream 206149 2670907 ~ 2742686 (+)
G114613 NA non-coding downstream 379547 2844305 ~ 2845453 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 183014 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 467223 1979046 ~ 1982566 (+)
G114330 NA other upstream 471062 1977004 ~ 1978727 (+)
AMCG00018105 NA other upstream 475865 1972838 ~ 1973924 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other upstream 500196 1947841 ~ 1949593 (+)
G114518 NA other downstream 26555 2491313 ~ 2568938 (+)
G114551 NA other downstream 176088 2640846 ~ 2647774 (+)
AMCG00018196 NA other downstream 1721652 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 2130175 4594933 ~ 4604105 (+)
G115049 NA other downstream 2296760 4761518 ~ 4763905 (+)

Expression


Co-expression Network