G114551


Basic Information

Item Value
gene id G114551
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2640846 ~ 2647774 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU143458
tttccaacacAAACTTGCACAAATtagttcagaaaaataaaaatgctttgtatctggttaatgtttttttttccataaattgTTTCTTTTACAGTTTTCTGGTGCAGAATTGCAACACGTTTCTCAGTTACAATATCAACAGAGTTTCATACCTGACTTGTCTGCATGTGGCCGTTGAACTCATTGTTCCTTTGTGAGAGAAAGGATTCCTGATAGGTTATCTTCTCTGTCCTGGGGAGGCTCGGGTCTCCGTCCTCCACCCCATTCCCCTTGTGGATGCACAGGACTTTGCGGAAGCTCTGCTTGAAGTTGTCAGAGAGAAAGCCGTAGAGTATGGGGTTGGCGCAGCTGTTGGCGTAGGACATGATCACCACGAAAAAATAGATCCCAGCCATGACGTTGTTCTCGGGCACGATGAACACCAGGTTGACCATGTTGAGGATGTAAAATGGCAGCCAGCAGCACACAAACACCACGACGATGATGACCACCATTTTGGTGACCTTTTTCTCCGACTTCCTCCTCTTGGTGAATCCGGCCCGCACACCAGAAGATTTCACCTTGACCACAATCAGCAAGTAGCACATGCAGATTACCAGCAGGGGCCCGAAGAAGCCCACGACGGAGGTGTAAATGATAAAGGCCGTGGACCACACGGCGTTGGGGTCTGGCCAGTTGATGTTGCAGGTGTTCAGTCCTTTCTGGACATCAGAGAAAATGATCACCGGTAGCACAACTAGAAAAGACAGACACCACACGGTGACGTTGATGAACTTTGCCACCCTGGGCCTGCGCCACTTTGTGGACTTGATGGGGTGCACCACAGCCAGATAGCGGTCTATGCTCATGACGGTCAGGCAGAAGATGCTGGTGAACTGGTTGATAGCATCCACCGTCATGACCAGCCGGCACATGAAGGACCCAAACGGCCAGTAGGAGAGCACGTTCTGTGTGGTGAGGAAGGGGAGGCCCAGCATGAACAGTTCATCGGCCACAGCCAAGTTCAGGATGTAGATGTTGGTAACGGTTTTCATCTTGGTGTACCGCAGGACCACGTAAATGGCCAGAGTGTTCCCGCTGAGTCCGACGATGAACACGGTCATATAAATCACAGGGATCAGGATTGTACTGATGCCCTCCAGAGGCGTCGcctttgtattgtttgtgtcaTAGGTGTGGTTGAGCTCCACAGGGCTGTCTGCCCAGGCTGAGCTTCCAAGTGGGTCCATTCTGGTGTGTGGTTTGACTGAGTCACAGGAAGTCCCCACAAAATACCTTTTTTAGTTTTCAGATCCTATCCATGGCTTTCAGTGGATGATTGTCTCCGTTCTGGTACATGCAGATGCGTCGGACACTTTCACGCCGAGGTCGACTGTCATCCTACGGGTTCGTCAGCAATCAGCCCCGGCAATTCAGtgaggaggggaaggggagagTCTGTGCGCGCAATCCGGTGGCAGCGGCACCAAACCCCGCGGAGAGGCTTCCTGAGCCCCGGCGATGCGCTGCGCTCCTCCAGGGCGCCCCTCACTGCTCCTTCACTCAGCCTGCCTTGGAATCTGCtattcacatatattttaatttaactttatcCTCACAATGCAATGTAGATATGTCGATCCAATGCCTCTCTCTCATGCATGTCAGTGAAAGTTTTCAGTGAAGAGCCCGGCTCCTCTGCTGTATTCCTGGTGTTAGACTACTTGTGCGCAGAGCTGCCCACTGCGCGGGTTTTTAACACCGTGGAGACGTGACACTGTGCGTCCCCCGTCATGCTGTTGCCATACCTTGGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143458 True 1794 TUCP 0.51 2 2640846 2647774

Neighbor

gene id symbol gene type direction distance location
AMCG00018138 NA coding upstream 61489 2574395 ~ 2579357 (+)
AMCG00018132 NA coding upstream 176088 2449789 ~ 2464758 (+)
AMCG00018130 LOC105893914,LOC107598040,LOC107571734 coding upstream 197318 2434456 ~ 2443528 (+)
AMCG00018133 NA coding upstream 207190 2433398 ~ 2433656 (+)
AMCG00018131 NA coding upstream 207864 2421265 ~ 2432982 (+)
AMCG00018146 NA coding downstream 51054 2698828 ~ 2717437 (+)
AMCG00018145 NA coding downstream 69728 2717502 ~ 2747393 (+)
AMCG00018144 NA coding downstream 135288 2783062 ~ 2786522 (+)
AMCG00018149 LOC107753764,LOC107661878,LOC107718604 coding downstream 140599 2788373 ~ 2793873 (+)
AMCG00018150 NA coding downstream 166673 2814447 ~ 2827770 (+)
G114548 LOC104962440 non-coding upstream 31434 2609143 ~ 2609412 (+)
G114531 NA non-coding upstream 66979 2573637 ~ 2573867 (+)
G114485 NA non-coding upstream 223050 2416807 ~ 2417796 (+)
G114484 NA non-coding upstream 228057 2410477 ~ 2412789 (+)
G114359 NA non-coding upstream 590669 2048571 ~ 2050177 (+)
G114553 NA non-coding downstream 20686 2668460 ~ 2668661 (+)
G114555 NA non-coding downstream 23133 2670907 ~ 2742686 (+)
G114613 NA non-coding downstream 196531 2844305 ~ 2845453 (+)
G114624 NA non-coding downstream 217214 2864988 ~ 2867237 (+)
G114629 NA non-coding downstream 234658 2882432 ~ 2882968 (+)
G114518 NA other upstream 71908 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 374071 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 658280 1979046 ~ 1982566 (+)
G114330 NA other upstream 662119 1977004 ~ 1978727 (+)
AMCG00018105 NA other upstream 666922 1972838 ~ 1973924 (+)
AMCG00018196 NA other downstream 1538636 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 1947159 4594933 ~ 4604105 (+)
G115049 NA other downstream 2113744 4761518 ~ 4763905 (+)
G115299 NA other downstream 3301689 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 3507714 6155488 ~ 6160616 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1667922 NA non-coding NC_048584.1 CM023238.2 15609714 ~ 15619443 (-)